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Alternative splice variants of AID are not stoichiometrically present at the protein level in chronic lymphocytic leukemia

机译:选择拼接变异的援助化学计量的出席的蛋白质水平在慢性淋巴细胞白血病

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摘要

Activation-induced deaminase (AID) is a DNA-mutating enzyme that mediates class-switch recombination as well as somatic hypermutation of antibody genes in B cells. Due to off-target activity, AID is implicated in lymphoma development by introducing genome-wide DNA damage and initiating chromosomal translocations such as c-myc/IgH. Several alternative splice transcripts of AID have been reported in activated B cells as well as malignant B cells such as chronic lymphocytic leukemia (CLL). As most commercially available antibodies fail to recognize alternative splice variants, their abundance in vivo, and hence their biological significance, has not been determined. In this study, we assessed the protein levels of AID splice isoforms by introducing an AID splice reporter construct into cell lines and primary CLL cells from patients as well as from WT and TCL1tg C57BL/6 mice (where TCL1 is T-cell leukemia/lymphoma 1). The splice construct is 5′-fused to a GFP-tag, which is preserved in all splice isoforms and allows detection of translated protein. Summarizing, we show a thorough quantification of alternatively spliced AID transcripts and demonstrate that the corresponding protein abundances, especially those of splice variants AID-ivs3 and AID-ΔE4, are not stoichiometrically equivalent. Our data suggest that enhanced proteasomal degradation of low-abundance proteins might be causative for this discrepancy.
机译:Activation-induced脱氨酶(援助)DNA-mutating酶,调节级调节重组以及体细胞hypermutation在B细胞抗体基因。活动,援助与淋巴瘤通过引入全基因组DNA损伤发展和初始染色体易位等原癌基因/本。援助在激活B细胞已报告等恶性B细胞慢性淋巴细胞白血病(CLL)。可用的抗体无法识别替代剪接变体,他们的丰富体内,因此他们的生物学意义,还未确定。评估援助拼接的蛋白质含量亚型通过引入一个援助拼接的记者构造成细胞系和初级慢性淋巴细胞白血病细胞从病人以及WT TCL1tgC57BL / 6小鼠(TCL1 t细胞白血病/淋巴瘤1)。拼接构造5 ' GFP-tag融合,这是保存在所有拼接亚型并允许检测翻译的蛋白质。全面量化或者拼接援助成绩单和证明相应的蛋白质丰度,特别是拼接的变体AID-ivs3和援助——ΔE4,不是化学计算的等效。建议增强的蛋白酶体降解low-abundance蛋白质可能病因这种差异。

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