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首页> 外文期刊>Journal of Computer-Aided Molecular Design >Influence of gauche effect on uncharged oxime reactivators for the reactivation of tabun-inhibited AChE: quantum chemical and steered molecular dynamics studies
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Influence of gauche effect on uncharged oxime reactivators for the reactivation of tabun-inhibited AChE: quantum chemical and steered molecular dynamics studies

机译:Gauche影响对禁忌疼痛再激活的无充电肟再激活的影响:量子化学与转向分子动力学研究

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摘要

The neutral oxime reactivator RS194B with a seven-membered ring has shown better efficacy towards the tabun-inhibited AChE than that of RS69N with a six-membered ring and RS41A with a five-membered ring. The difference in the efficacy of these reactivators has remained unexplored. We report here the origin of the difference of efficacy of these reactivators based on the conformational analysis, quantum chemical calculations and steered molecular dynamics (SMD) simulations. The conformational analysis using B3LYP/6-31G(d) level of theory revealed that RS41A and RS194B are more stable in gauche conformation due to the gauche effect (-N-C-C-N- bonds) whereas RS69N prefers anti-conformation. The SMD simulations show that RS194B retains in more stable gauche conformation inside the active gorge of AChE during different time intervals that experiences more hydrogen bonding, hydrophobic interactions with the catalytic anionic site (CAS) residues and weaker interactions with the peripheral anionic site (PAS) residues compared to RS41A and RS69N. In an effort to design an even superior reactivator, RS194B-S has been chosen with a subtle change in the geometry of RS194B by replacing the carbonyl oxygen with the sulfur atom. The newly designed reactivator RS194B-S can also be a promising candidate to reactivate tabun-inhibited AChE.
机译:七元环的中性肟再活化剂RS194B比六元环的RS69N和五元环的RS41A对tabun抑制的乙酰胆碱酯酶表现出更好的效果。这些再活化剂的功效差异仍有待探索。基于构象分析、量子化学计算和导向分子动力学(SMD)模拟,我们在此报告了这些再活化剂功效差异的来源。利用B3LYP/6-31G(d)理论水平进行的构象分析表明,由于gauche效应(-N-C-C-N-键),RS41A和RS194B在gauche构象中更稳定,而RS69N更倾向于反构象。SMD模拟显示,与RS41A和RS69N相比,RS194B在不同的时间间隔内,在乙酰胆碱酯酶活性谷内保持更稳定的gauche构象,与催化阴离子位点(CAS)残基发生更多氢键、疏水相互作用,与外围阴离子位点(PAS)残基发生较弱的相互作用。为了设计更好的再活化剂,选择了RS194B-S,通过用硫原子取代羰基氧,对RS194B的几何结构进行了细微的改变。新设计的再激活剂RS194B-S也有望重新激活塔本抑制的乙酰胆碱酯酶。

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