首页> 外文期刊>Journal of Molecular Biology >Thermodynamic and kinetic characterization of a germ line human lambda6 light-chain protein: the relation between unfolding and fibrillogenesis.
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Thermodynamic and kinetic characterization of a germ line human lambda6 light-chain protein: the relation between unfolding and fibrillogenesis.

机译:人类lambda6轻链种系的热力学和动力学表征:展开和原纤维形成之间的关系。

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Proteins encoded by the gene segment 6a of the lambda variable light-chain repertoire are strongly associated with amyloid deposition. 6aJL2 is a model protein constructed with the predicted sequences encoded by the 6a and JL2 germ line genes. In this work, we characterized the urea- and temperature-induced unfolding of 6aJL2. In the short time scale, spectroscopic, hydrodynamic and calorimetric experiments were compatible with a two-state transition. Furthermore, DeltaG, m and the midpoint urea concentration obtained from equilibrium experiments were compatible with those obtained from kinetic experiments. Since fibril formation is a slow process, samples were also incubated for longer times. After incubation for several hours at 37 degrees C, spectroscopic, hydrodynamic and calorimetric experiments revealed the presence of a partially unfolded off-pathway intermediate around the midpoint urea concentration (1.5-3.0 M urea). In vitro fibrillogenesis assays show that the maximum growth rate for fibril formation and the minimum lag time were obtained at urea concentrations where the partially unfolded state was populated (2.5 M urea at 37 degrees C). This indicates that this partially unfolded state is critical for in vitro fibril formation. Concentration-dependent kinetics and hydrodynamic properties of the intermediate were consistent with a soluble oligomeric state. The intermediate is formed around the midpoint urea concentration, where the native and unfolded states are equally populated and their rate of interconversion is the slowest. This situation may promote the slow accumulation of an intermediate state that is prone to aggregate.
机译:由λ可变轻链组成部分的基因区段6a编码的蛋白质与淀粉样蛋白沉积强烈相关。 6aJL2是一种模型蛋白,由6a和JL2种系基因编码的预测序列构成。在这项工作中,我们表征了尿素和温度诱导的6aJL2的展开。在短时间内,光谱,流体动力学和量热实验与两态跃迁兼容。此外,从平衡实验获得的DeltaG,m和中点尿素浓度与从动力学实验获得的值相吻合。由于原纤维形成是一个缓慢的过程,因此样品也需要孵育更长的时间。在37摄氏度下温育几个小时后,光谱,流体力学和量热实验显示,在中点尿素浓度(1.5-3.0 M尿素)附近存在部分未折叠的偏离路径的中间体。体外原纤维形成测定表明,在部分未折叠状态的尿素浓度下(37℃下为2.5 M尿素),可获得最大的原纤维形成生长速率和最短的滞后时间。这表明该部分展开状态对于体外原纤维形成至关重要。中间体的浓度依赖性动力学和流体力学性质与可溶性低聚物状态一致。中间体是在尿素中点浓度附近形成的,天然和未折叠状态的尿素浓度相同,它们的相互转化速率最慢。这种情况可能会促进易于聚集的中间状态的缓慢积累。

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