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首页> 外文期刊>Journal of Chemometrics >A pilot study on colonic mucosal tissues by fluorescence spectroscopy technique: Discrimination by principal component analysis (PCA) and artificial neural network (ANN) analysis
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A pilot study on colonic mucosal tissues by fluorescence spectroscopy technique: Discrimination by principal component analysis (PCA) and artificial neural network (ANN) analysis

机译:荧光光谱技术对结肠黏膜组织的初步研究:通过主成分分析(PCA)和人工神经网络(ANN)分析进行区分

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摘要

Pulsed laser-induced autofluorescence spectra of pathologically certified normal and malignant colonic mucosal tissues were recorded at 325 nm excitation. The spectra were analysed using three different methods for discrimination purposes. First, all the spectra were subjected to the principal component analysis (PCA) and the discrimination between normal and malignant cases were achieved using parameters like, spectral residuals, Mahalanobis distance and scores of factors. Second, to understand the changes in tissue composition between the two classes (normal, and malignant), difference spectrum was constructed by subtracting mean spectrum of calibration set samples from simulated mean of all spectra of any one class (normal/malignant) and in third, artificial neural network (ANN) analysis was carried out on the same set of spectral data by training the network with spectral features like, mean, median, spectral residual, energy, standard deviation, number of peaks for different thresholds (100,250 and 500) after carrying out 1 st-order differentiation of the training set samples and discrimination between normal and malignant conditions were achieved. The specificity and sensitivity were determined in PCA and ANN analyses and they were found to be 100 and 91.3% in PCA, and 100 and 93.47% in ANN, respectively.
机译:经病理证实的正常和恶性结肠粘膜组织的脉冲激光诱导的自发荧光光谱在325 nm激发下记录。为了区分目的,使用三种不同方法分析了光谱。首先,对所有光谱进行主成分分析(PCA),并使用光谱残差,马氏距离和因子得分等参数来区分正常病例和恶性病例。其次,为了了解两类(正常和恶性)之间组织成分的变化,通过从任一类(正常/恶性)的所有光谱的模拟平均值中减去校准组样本的平均光谱来构造差异光谱,人工神经网络(ANN)分析是通过训练具有光谱特征的网络对同一组光谱数据进行的,例如平均值,中位数,光谱残差,能量,标准差,不同阈值(100,250和500)的峰数在对训练集样本进行1阶区分后,可以区分正常和恶性疾病。在PCA和ANN分析中确定了特异性和敏感性,发现PCA分别为100和91.3%,ANN为100和93.47%。

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