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A neural network model for cell classification based on single-cell biomechanical properties

机译:基于单细胞生物力学特性的细胞分类神经网络模型

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The potential success of tissue engineering or other cell-based therapies is dependent on factors such as the purity and homogeneity of the source cell populations. The ability to enrich cell harvests for specific phenotypes can have significant effects on the overall success of such therapies. While most techniques for cell sorting or enrichment have relied on cell surface markers, recent studies have shown that single-cell mechanical properties can serve as identifying markers of phenotype. In this study, a neural network modeling approach was developed to classify mesenchymal-derived primary and stem cells based on their biomechanical properties. Cell sorting was simulated using previously published data characterizing the mechanical properties of several different cell types as measured by atomic force microscopy. Neural networks were trained using combined data sets, with the resultant groupings analyzed for their purity, efficiency, and enrichment. Heterogeneous populations of zonal chondrocytes, chondrosarcoma cells, and mesenchymal-lineage cells, respectively, could all be classified into enriched subpopulations. Additionally, adult stem cells (adipose-derived or bone marrow-derived) separated disproportionately into nodes associated with the three primary mesenchymal lineages examined. These findings suggest that mathematical approaches such as neural network modeling, in combination with novel measures of cell properties, may provide a means of classifying and eventually sorting mixed populations of cells that are otherwise difficult to identify using more established techniques. In this respect, the identification of biomechanically based cell properties that increase the percentage of stem cells capable of differentiating into predictable lineages may improve the overall success of cell-based therapies.
机译:组织工程或其他基于细胞的疗法的潜在成功取决于因素,例如源细胞群体的纯度和同质性。丰富特定表型的细胞收获物的能力可对此类疗法的整体成功产生重大影响。虽然大多数用于细胞分选或富集的技术都依赖于细胞表面标记,但最近的研究表明,单细胞机械性质可以用作表型的鉴定标记。在这项研究中,开发了一种神经网络建模方法,以基于间充质来源的原代和干细胞的生物力学特性对其进行分类。使用以前发表的数据模拟细胞分选,该数据表征了几种不同细胞类型的机械性能,如通过原子力显微镜测量的。使用组合数据集对神经网络进行了训练,并对所得分组进行了纯度,效率和富集分析。分别将带状软骨细胞,软骨肉瘤细胞和间充质谱系细胞的异质群体全部归类为富集的亚群。此外,成体干细胞(脂肪来源或骨髓来源)不成比例地分离成与所检查的三个主要间充质谱系相关的淋巴结。这些发现表明,诸如神经网络建模之类的数学方法与细胞特性的新颖度量相结合,可能提供一种分类并最终分类混合细胞群体的方法,而这些方法否则很难使用更成熟的技术来识别。在这方面,鉴定增加能够分化成可预测谱系的干细胞的百分比的基于生物力学的细胞特性可以改善基于细胞的疗法的总体成功。

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