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Development of a novel LAMP diagnostic method for visible detection of swine Pasteurella multocida

机译:用于猪多杀性巴斯德氏菌可见检测的新型LAMP诊断方法的开发

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摘要

A set of four specific primers for six regions of kmt1 gene from a species specific region was designed for developing the loop-mediated isothermal amplification diagnostic method of swine Pasteurella multocida (Pm-LAMP). After the Pm-LAMP was carried out at 63°C for 1 h, the LAMP products could be visually confirmed using fluorescent dyes as detection reagent under UV-illumination. In sensitivity, the detection limit of the Pm-LAMP was 10 cfu/mL, and was 1 log less than that of the PCR method. In specificity, the Pm-LAMP did not amplify genomic DNA of swine common respiratory pathogens. Furthermore, based on results for clinical swab samples (n = 31) using PCR detection as golden standard, relative sensitivity of the Pm-LAMP was 100%, relative specificity of the Pm-LAMP was 90.9%, and percentage of observation agreement was 93.5% (Kappa = 0.85). The Pm-LAMP method should be a useful diagnostic tool for rapid and visible detection of swine Pasteurella multocida.
机译:设计了一组来自物种特定区域的kmt1基因六个区域的四种特异性引物,用于开发多杀猪巴斯德氏菌(Pm-LAMP)的环介导的等温扩增诊断方法。在63°C下将Pm-LAMP进行1 h后,可以使用荧光染料作为检测试剂在紫外线照射下目视确认LAMP产物。在灵敏度方面,Pm-LAMP的检测限为10 cfu / mL,比PCR方法少1 log。在特异性上,Pm-LAMP不能扩增猪常见呼吸道病原体的基因组DNA。此外,基于以PCR检测为黄金标准的临床拭子样本(n = 31)的结果,Pm-LAMP的相对敏感性为100%,Pm-LAMP的相对特异性为90.9%,观察到的百分比为93.5 %(Kappa = 0.85)。 Pm-LAMP方法应该是一种有用的诊断工具,可以快速,可见地检测出多杀性巴氏杆菌。

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