首页> 外文期刊>Tree Genetics & Genomes >Analyses of genetic population structure of two ecologically important mangrove tree species, Bruguiera gymnorrhiza and Kandelia obovata from different river basins of Iriomote Island of the Ryukyu Archipelago, Japan
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Analyses of genetic population structure of two ecologically important mangrove tree species, Bruguiera gymnorrhiza and Kandelia obovata from different river basins of Iriomote Island of the Ryukyu Archipelago, Japan

机译:日本琉球群岛西表岛不同流域的两种具有生态重要性的红树林树种Bruguiera Gymnorrhiza和Kandelia obovata的遗传种群结构分析

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We analyzed nuclear and chloroplast microsatellite makers to assess genetic diversity and examine genetic structure of two mangrove tree species, Bruguiera gymnorrhiza and Kandelia obovata recovered from nine major river basins of Iriomote Island of the Ryukyu Archipelago, Japan. The average number of alleles per nuclear locus per population was 2.6 in B. gymnorrhiza and 1.7 in K. obovata. Bayesian clustering analysis using Instruct identified two genetic clusters in B. gymnorrhiza and three clusters in K. obovata. Chloroplast microsatellites revealed two dominant haplotypes from B. gymnorrhiza and three haplotypes from K. obovata. The overall result suggests low genetic diversity for both species. AMOVA for nuclear microsatellites showed 9.3 % of population variation in B. gymnorrhiza. Although genetic differentiation between several populations was significant in this species, F_(ST) suggested low to moderate level of differentiations between most of the populations. Distribution of genetic clusters and chloroplast haplotypes also suggested weak differentiations among B. gymnorrhiza populations. In K. obovata, population variation was, however, relatively high (27.8 %). The high differentiation between K. obovata populations was also suggested from the F_(ST) and genetic clusters from nuclear microsatellites, and chloroplast haplotypes. A significant correlation between chloroplast genetic distances and coastline distances as well as haplotype distributions for both species suggest that propagules from each species mostly disperse to the neighboring river basins. While significant F_(ST) and higher percentage of admixed clusters from nuclear microsatellites suggested inbreeding, continual gene exchange by propagule dispersal among populations especially among neighboring populations was suggested for both species from maternally inherited chloroplast microsatellites analyses.
机译:我们分析了核和叶绿体微卫星制造商,以评估遗传多样性并检查从日本琉球群岛的西表岛的九个主要河流域中回收的两种红树林树种布鲁氏裸藻和宽叶红皮草的遗传结构。每个人群中每个核基因座的等位基因平均数为2.6,而卵圆K.为1.7。使用Instruct进行的贝叶斯聚类分析确定了裸露双歧杆菌中的两个遗传簇和长卵形拟南芥中的三个遗传簇。叶绿体微卫星揭示了裸露双歧杆菌的两个优势单倍型和卵圆K.的三个单倍型。总体结果表明两种物种的遗传多样性均较低。核微卫星的AMOVA显示,裸子叶杆菌的种群变异为9.3%。尽管该种群中几个种群之间的遗传分化很显着,但F_(ST)表明大多数种群之间的分化水平较低至中等。遗传簇和叶绿体单倍型的分布也表明裸子叶杆菌种群之间的弱分化。然而,在K. obovata,种群变异较高(27.8%)。还从F_(ST)和核微卫星的遗传簇以及叶绿体单倍型中发现了卵圆角拟杆菌种群之间的高度分化。这两个物种的叶绿体遗传距离与海岸线距离以及单倍型分布之间的显着相关性表明,每个物种的繁殖体大多散布到附近的流域。虽然显着的F_(ST)和来自核微卫星的较高混合簇百分比表明近亲繁殖,但对于通过母本遗传的叶绿体微卫星分析得出的两个物种,建议通过种群之间传播传播来进行连续基因交换,特别是在邻近种群之间。

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