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K-Means Multi-Verse Optimizer (KMVO) Algorithm to Construct DNA Storage Codes

机译:K-mease Multi-Verse Optimizer(KMVO)算法构建DNA存储码

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摘要

In an era of information explosion, dealing with massive data has become a problem. Since DeoxyriboNucleic Acid (DNA) is a high-density storage medium with long storage endurance, a DNA based storage system is a viable solution. The first consideration of a DNA storage system is the DNA codes, which can avoid non-specific hybridization of DNA strands in the hybridization reaction process by using related constraints, such as Hamming distance constraints, GC-content constraints, and no-runlength constraints. A K-means Multi-Verse Optimizer (KMVO) algorithm is proposed to construct a better code boundary than the previous Multi-Verse Optimizer (MVO) algorithm that satisfies the above constraints. Our results can store information more efficiently over a given length, increasing storage utilization.
机译:在信息爆炸时代,处理大规模数据已成为一个问题。由于脱氧核糖核酸(DNA)是具有长储存耐久性的高密度存储介质,因此基于DNA的存储系统是可行的解决方案。 DNA储存系统的第一次考虑是DNA代码,其可以通过使用相关的约束,例如汉明距离约束,GC含量约束和无运行长度约束,避免在杂交反应过程中的DNA链中的非特异性杂交。提出了一种K-Meary-Verse Optimizer(KMVO)算法来构造比先前的多韵优化器(MVO)算法构建更好的代码边界,这些算法满足上述约束。我们的结果可以在给定长度上更有效地存储信息,提高存储利用率。

著录项

  • 来源
    《Quality Control, Transactions》 |2020年第2020期|29547-29556|共10页
  • 作者

    Cao Ben; Zhao Sue; Li Xue; Wang Bin;

  • 作者单位

    Dalian Univ Sch Software Minist Educ Key Lab Adv Design & Intelligent Comp Dalian 116622 Peoples R China;

    Dalian Univ Sch Software Minist Educ Key Lab Adv Design & Intelligent Comp Dalian 116622 Peoples R China;

    Dalian Univ Sch Software Minist Educ Key Lab Adv Design & Intelligent Comp Dalian 116622 Peoples R China;

    Dalian Univ Sch Software Minist Educ Key Lab Adv Design & Intelligent Comp Dalian 116622 Peoples R China;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    DNA code design; DNA storage; k-means; MVO algorithm;

    机译:DNA规范设计;DNA储存;K-means;MVO算法;

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