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首页> 外文期刊>Polar science >Community structure of culturable bacteria on surface of Gulkana Glacier, Alaska
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Community structure of culturable bacteria on surface of Gulkana Glacier, Alaska

机译:阿拉斯加古尔卡纳冰川表面可培养细菌的群落结构

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摘要

Viable bacterial communities on the surface of Gulkana Glacier (Alaska) were investigated using a cultivation method. Viable bacteria were isolated using R2A, diluted-R2A (DR2A), LB, diluted-LB (DLB), and xylose agar at 4, 15 and 25 ℃. The highest number of colony-forming units (CFU) was observed on DR2A agar plates at 4 ℃, ranging from 10~4—10~5 CFU mL~(-1). A collection of 234 morphologically distinct isolates was obtained in total. The glacial snow and ice sample was dominated by Betaproteo-bacteria (97 isolates) and Gammaproteobacteria (87 isolates). The bacterial communities were examined by amplifying 16S rRNA genes from the isolates, and 34 phylotypes with >99% similarities were obtained. Of these phylotypes, 26 (76.5%) were similar to those phylotypes found in bacteria that were previously recorded from cold environments. Five of the phylotypes appeared in the clone library of a previous independent cultivation study, corresponding with 6.5% in the clone library. Our results suggest that cold environments harbor common phylotypes of culturable bacteria, which could possibly lead to a better understanding of bacterial diversity on glaciers in combination with molecular studies.
机译:使用培养方法研究了古尔卡纳冰川(阿拉斯加)表面上的活细菌群落。在4、15和25℃下,使用R2A,稀释的R2A(DR2A),LB,稀释的LB(DLB)和木糖琼脂分离活细菌。在4℃的DR2A琼脂平板上观察到最高的菌落形成单位(CFU),范围为10〜4〜10〜5 CFU mL〜(-1)。总共获得了234个形态上不同的分离物的集合。冰雪样品中的冰和冰样品主要由Beta变形细菌(97个分离株)和Gamma变形细菌(87个分离株)组成。通过从分离物中扩增16S rRNA基因来检查细菌群落,并获得了34种具有> 99%相似性的系统型。在这些系统型中,有26种(76.5%)与以前在寒冷环境中记录到的细菌中的系统型相似。其中五个系统型出现在先前的独立培养研究的克隆文库中,相当于克隆文库中的6.5%。我们的结果表明,寒冷的环境藏有可培养细菌的常见系统型,与分子研究相结合,可能会导致人们更好地了解冰川上的细菌多样性。

著录项

  • 来源
    《Polar science》 |2011年第1期|p.41-51|共11页
  • 作者单位

    Transdisciplinary Research Integration Center, 4-3-13 Toranomon, Minato-ku, Tokyo 105-0001, Japan,Biology Group, National Institute of Polar Research, 10-3, Midori-cho, Tachikawa-shi, Tokyo 190-8518, Japan;

    College of Agriculture, Tamagawa University, 6-1-1 Tamagawagakuen, Machida-shi, Tokyo 194-8610, Japan;

    Transdisciplinary Research Integration Center, 4-3-13 Toranomon, Minato-ku, Tokyo 105-0001, Japan,Biology Group, National Institute of Polar Research, 10-3, Midori-cho, Tachikawa-shi, Tokyo 190-8518, Japan;

    Biology Group, National Institute of Polar Research, 10-3, Midori-cho, Tachikawa-shi, Tokyo 190-8518, Japan;

    Wildlife Research Center of Kyoto University, 2-24 Tanaka-Sekiden-cho, Sakyo-ku, Kyoto 606-8203, Japan;

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  • 正文语种 eng
  • 中图分类
  • 关键词

    cold environment; glacier; psychrophile; microbial ecology; cultivation; phylogenetic study;

    机译:寒冷的环境冰川;嗜冷菌微生物生态学培养系统发育研究;

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