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Contribution towards a morphological and molecular taxonomic reference library of benthic marine diatoms from two Arctic fjords on Svalbard (Norway)

机译:来自斯瓦尔巴特群岛(挪威)的两个北极峡湾底栖海藻硅藻的形态学和分子分类学参考文库的贡献

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摘要

Knowledge on benthic diatom taxonomy and hence biodiversity from Arctic locations is rare, though the few existing analyses address morphological characteristics only. Morphological treatment is a time-consuming process and just allows the taxonomic identification of a low sample volume. In contrast, molecular sequencing is a faster and universally applicable approach, and also has the potential for refined analyses. Unfortunately, a lot of molecular information in databases is not trustable, and often existing genetic data do not fit together with morphological aspects. Therefore, the main goal of our study was for the first time to combine both morphological features and DNA information on benthic Arctic diatoms. In a first step, we studied the morphology of 26 strains from the Rostock Culture Collection of Arctic diatoms via light and electron microscopies. Secondly, we addressed their molecular taxonomy by sequencing the DNA barcode 18S V4 and the chloroplast marker rbcL. As a result, we could identify five species. Seven of the altogether twelve taxa could not be attributed to any known species, because listed sequences and morphology did not fit together. From these, three species were described as new to science here. Although the studied strains represent only a minor fraction of the diatom flora of Svalbard, this study is a first milestone in coupling morphological and molecular data of benthic diatoms in such high latitudes. By making these data available online, they contribute to a taxonomic reference library for Arctic benthic diatoms and are available for comparative studies.
机译:尽管很少有现有的分析仅针对形态特征,但对北极底栖硅藻分类学以及北极地区生物多样性的了解很少。形态学处理是一个耗时的过程,并且仅允许分类学鉴定少量样品。相比之下,分子测序是一种更快且普遍适用的方法,也具有进行精细分析的潜力。不幸的是,数据库中的许多分子信息是不可信的,并且现有的遗传数据常常与形态学方面不符。因此,我们研究的主要目标是首次结合底栖北极硅藻的形态特征和DNA信息。第一步,我们通过光和电子显微镜研究了来自北极硅藻的罗斯托克培养物收藏中心的26个菌株的形态。其次,我们通过测序DNA条码18S V4和叶绿体标记rbcL来解决它们的分子分类学问题。结果,我们可以识别出五个物种。总共十二个分类单元中的七个不能归因于任何已知物种,因为列出的序列和形态不匹配。从这些物种中,三个物种在这里被描述为是新的。尽管所研究的菌株仅代表斯瓦尔巴特群岛硅藻区系的一小部分,但这项研究是在如此高的纬度耦合底栖硅藻的形态学和分子数据方面的第一个里程碑。通过在线提供这些数据,它们可为北极底栖硅藻提供分类学参考资料库,并可用于比较研究。

著录项

  • 来源
    《Polar biology》 |2016年第11期|1933-1956|共24页
  • 作者单位

    Free Univ Berlin, Bot Garten & Bot Museum Dahlem, Konigin Luise Str 6-8, D-14195 Berlin, Germany;

    Free Univ Berlin, Bot Garten & Bot Museum Dahlem, Konigin Luise Str 6-8, D-14195 Berlin, Germany;

    Univ Rostock, Inst Biol Sci Appl Ecol & Phycol, Albert Einstein Str 3, D-18057 Rostock, Germany;

    Univ Rostock, Inst Biol Sci Appl Ecol & Phycol, Albert Einstein Str 3, D-18057 Rostock, Germany;

    Univ Rostock, Inst Biol Sci Appl Ecol & Phycol, Albert Einstein Str 3, D-18057 Rostock, Germany;

    Free Univ Berlin, Bot Garten & Bot Museum Dahlem, Konigin Luise Str 6-8, D-14195 Berlin, Germany;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Morphology; Molecular taxonomy; DNA barcode; 18S V4; rbcL;

    机译:形态学;分子分类学;DNA条形码;18S V4;rbcL;

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