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Prokaryotic diversity in four microbial mats on the Fildes Peninsula, King George Island, maritime Antarctica

机译:南极海洋国王乔治岛菲尔德斯半岛上四个微生物垫的原核生物多样性

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摘要

Most of Fildes Peninsula is ice-free during summer thereby allowing for formation of networks of creeks with meltwater from Collins Glacier and snowmelt. A variety of benthic microbial mats develop within these creeks. The composition of these microbial communities has not been studied in detail. In this report, clone libraries of bacterial and cyanobacterial 16S rRNA genes were used to describe the microbial community structure of four mats near a shoreline of Drake Passage. Samples were collected from four microbial mats, two at an early developmental stage (December) and two collected latter in late summer (April). Sequence analysis showed that filamentous Cyanobacteria, Alphaproteobacteria, and Betaproteobacteria were the most abundant ribotypes. Diversity indices were comparable for the four mats. Bacterial libraries from mat samples collected in December represented primarily Alphaproteobacterial and Betaproteobacterial ribotypes. In contrast, filamentous Cyanobacteria as well as Alphaproteobacteria were most abundant in libraries derived from samples collected in April. Differences in relative abundances may reflect the succession of microbial communities during the austral summer. Composition of cyanobacterial orders in bacterial libraries obtained from mats collected in late summer were different compared with their corresponding cyanobacterial libraries. This may be the result of divergence in primer specificities. Nostocales, Oscillatoriales, and Synechococcales orders were the dominant ribotypes represented in cyanobacterial libraries. Some taxa of cyanobacteria identified using this strategy coincided with previous studies of others in the same region using microscopic techniques. Future work should combine microscopy, culture-dependent and culture-independent strategies to better describe microbial mats in maritime Antarctica.
机译:菲尔德斯半岛的大部分地区在夏季无冰,因此可以与柯林斯冰川和融雪融化的水形成小河网络。在这些小溪中形成了各种各样的底栖微生物垫。这些微生物群落的组成尚未详细研究。在此报告中,细菌和蓝细菌16S rRNA基因的克隆文库用于描述Drake Passage海岸线附近四个垫子的微生物群落结构。从四个微生物垫上收集样品,两个在发育初期(12月),两个在夏末(4月)收集。序列分析表明丝状蓝细菌,α-蛋白细菌和β-蛋白细菌是最丰富的核糖型。四个垫子的多样性指数相当。 12月收集的席子样品中的细菌文库主要代表Alphaproteobacterial和Betaproteobacterial核糖型。相比之下,丝状蓝细菌和丙酸杆菌在从4月份收集的样本中获得的文库中含量最高。相对丰度的差异可能反映了南方夏季微生物群落的演替。从夏末收集的垫子中获得的细菌库中的蓝细菌顺序组成与其相应的蓝细菌库相比有所不同。这可能是引物特异性差异的结果。念珠菌属,颤动菌属和突触球菌属是蓝细菌文库中的主要核糖型。使用这种策略确定的一些蓝细菌类群与以前使用显微镜技术在同一地区进行的其他类群研究相吻合。未来的工作应该结合显微镜,依赖于文化和不依赖于文化的策略来更好地描述南极海洋微生物垫。

著录项

  • 来源
    《Polar biology》 |2018年第5期|935-943|共9页
  • 作者单位

    Inst Invest Biol Clemente Estable MEC, Unidad Microbiol Mol, Av Italia 3318, Montevideo 11600, Uruguay;

    Inst Invest Biol Clemente Estable MEC, Unidad Microbiol Mol, Av Italia 3318, Montevideo 11600, Uruguay;

    Univ Fed Parana, Dept Biochem & Mol Biol, CP 19046, Curitiba, PR, Brazil;

    Inst Invest Biol Clemente Estable MEC, Unidad Microbiol Mol, Av Italia 3318, Montevideo 11600, Uruguay;

    Inst Invest Biol Clemente Estable MEC, Unidad Microbiol Mol, Av Italia 3318, Montevideo 11600, Uruguay;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Microbial mat; Maritime Antarctica; 16S rRNA gene clone library; Microbial diversity;

    机译:微生物垫;南极海;16S rRNA基因克隆文库;微生物多样性;

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