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Femtosecond X-ray protein nanocrystallography

机译:飞秒X射线蛋白质纳米晶体

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摘要

X-ray crystallography provides the vast majority of macromolecular structures, but the success of the method relies on growing crystals of sufficient size. In conventional measurements, the necessary increase in X-ray dose to record data from crystals that are too small leads to extensive damage before a diffraction signal can be recorded. It is particularly challenging to obtain large, well-diffracting crystals of membrane proteins, for which fewer than 300 unique structures have been determined despite their importance in all living cells. Here we present a method for structure determination where single-crystal X-ray diffraction 'snapshots' are collected from a fully hydrated stream of nanocrystals using femtosecond pulses from a hard-X-ray free-electron laser, the Linac Coherent Light Source. We prove this concept with nanocrystals of photosystem I, one of the largest membrane protein complexes. More than 3,000,000 diffraction patterns were collected in this study, and a three-dimensional data set was assembled from individual photosystem I nanocrystals (~200 nm to 2 μm in size). We mitigate the problem of radiation damage in crystallography by using pulses briefer than the timescale of most damage processes. This offers a new approach to structure determination of macromolecules that do not yield crystals of suf-ficient size for studies using conventional radiation sources or are particularly sensitive to radiation damage.
机译:X射线晶体学提供了绝大多数的大分子结构,但是该方法的成功依赖于生长足够大小的晶体。在常规测量中,为了记录来自太小的晶体的数据而必须增加的X射线剂量会导致广泛的损坏,然后才能记录衍射信号。获得大的,良好衍射的膜蛋白晶体尤其具有挑战性,尽管它们在所有活细胞中都很重要,但已确定不到300个独特的结构。在这里,我们介绍了一种结构确定方法,其中使用来自硬X射线自由电子激光器(直线加速器相干光源)的飞秒脉冲从完全水合的纳米晶体流中收集单晶X射线衍射“快照”。我们用最大的膜蛋白复合物之一的光系统I的纳米晶体证明了这一概念。在这项研究中,收集了超过3,000,000个衍射图,并从单个光系统I纳米晶体(尺寸约200 nm至2μm)组装了三维数据集。通过使用比大多数破坏过程的时间尺度更短的脉冲,我们减轻了晶体学中的辐射破坏问题。这为大分子的结构确定提供了一种新方法,该方法不能产生足够大小的晶体,无法使用常规辐射源进行研究,或者对辐射损伤特别敏感。

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  • 来源
    《Nature》 |2011年第7332期|p.73-77|共5页
  • 作者单位

    Center for Free-Electron Laser Science, DESY, Notkestrasse 85,22607 Hamburg, Germany,University of Hamburg, Luruper Chaussee 149,22761 Hamburg, Germany;

    Department of Chemistry and Biochemistry, Arizona State University, Tempe, Arizona 85287-1604, USA;

    Center for Free-Electron Laser Science, DESY, Notkestrasse 85,22607 Hamburg, Germany;

    Center for Free-Electron Laser Science, DESY, Notkestrasse 85,22607 Hamburg, Germany;

    Department of Physics, Arizona State University, Tempe, Arizona 85287, USA;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
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