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首页> 外文期刊>Marine Biotechnology >Identification of Genes Potentially Related to Biomineralization and Immunity by Transcriptome Analysis of Pearl Sac in Pearl Oyster Pinctada martensii
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Identification of Genes Potentially Related to Biomineralization and Immunity by Transcriptome Analysis of Pearl Sac in Pearl Oyster Pinctada martensii

机译:通过珍珠牡蛎Pinctada martensii中的珍珠囊的转录组分析鉴定潜在与生物矿化和免疫相关的基因。

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摘要

Pearl oyster Pinctada martensii is cultured for production of pearl in China. It needs to implant a mantle graft cut from a donor oyster and a seed nucleus into the gonad of the host oyster to produce a pearl. Pearl sac surrounding the nucleus is formed by the proliferation of the implanted mantle graft from the outer mantle epithelial cells in the host oyster. The pearl sac is responsible for production of a cultured pearl. A comprehensive transcriptome analysis on pearl sac will help to understand the mechanism on pearl formation and immune response of host oyster after nucleus implantation. In the present study, 39,400,004 reads were produced from the pearl sac using RNA-sequence technology and then assembled into 102,762 unigenes. More than 22.4% of these unigenes were possibly involved in approximately 219 known signaling pathways. A total of 37,188 unigenes were annotated based on sequences similarities with known proteins. Fifty-one biomineralization-related unigenes and 268 immune-related unigenes were not previously detected in P. martensii. The un-annotated unigenes may be some genes specifically existed in P. martensii. These annotated or un-annotated unigenes in the present studies were valuable for the future investigation on molecular mechanism of pearl formation and immune response of the species.
机译:在中国养殖珍珠牡蛎Pinctada martensii。它需要将从供体牡蛎和种子核切下的地幔移植物植入宿主牡蛎的性腺中以产生珍珠。胚核周围的珍珠囊是由宿主牡蛎中外层上皮细胞的植入的层间移植物的增殖形成的。珍珠囊负责养殖珍珠的生产。对珍珠囊进行全面的转录组分析将有助于了解成核后宿主牡蛎的珍珠形成和免疫反应的机制。在本研究中,使用RNA序列技术从珍珠囊中产生了39400004个读段,然后将其组装成102762个单基因。这些单基因中超过22.4%可能参与了大约219个已知信号通路。基于与已知蛋白质的序列相似性,总共注释了37,188个单基因。先前未在马氏疟原虫中检测到51个生物矿化相关的单基因和268个免疫相关的单基因。未注释的单基因可能是马氏疟原虫中特有的一些基因。本研究中这些带注释或不带注释的单基因对于珍珠形成的分子机理和该物种的免疫反应的未来研究是有价值的。

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  • 来源
    《Marine Biotechnology 》 |2012年第6期| p.730-739| 共10页
  • 作者单位

    Fishery College, Guangdong Ocean University, 40 East Jiefang Road, Xiashan District, Zhanjiang City, Guangdong, 524025, China;

    Fishery College, Guangdong Ocean University, 40 East Jiefang Road, Xiashan District, Zhanjiang City, Guangdong, 524025, China;

    Fishery College, Guangdong Ocean University, 40 East Jiefang Road, Xiashan District, Zhanjiang City, Guangdong, 524025, China;

    Fishery College, Guangdong Ocean University, 40 East Jiefang Road, Xiashan District, Zhanjiang City, Guangdong, 524025, China;

    Fishery College, Guangdong Ocean University, 40 East Jiefang Road, Xiashan District, Zhanjiang City, Guangdong, 524025, China;

    Fishery College, Guangdong Ocean University, 40 East Jiefang Road, Xiashan District, Zhanjiang City, Guangdong, 524025, China;

    Fishery College, Guangdong Ocean University, 40 East Jiefang Road, Xiashan District, Zhanjiang City, Guangdong, 524025, China;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Pinctada martensii; Pearl sac; Transcriptome; Pearl formation; Immune response;

    机译:马氏梭菌;珍珠囊;转录组;珍珠形成;免疫反应;

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