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Exact and approximate distributions of protein and mRNA levels in the low-copy regime of gene expression

机译:低拷贝基因表达中蛋白质和mRNA水平的精确和近似分布

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摘要

Gene expression at the single-cell level incorporates reaction mechanisms which are intrinsically stochastic as they involve molecular species present at low copy numbers. The dynamics of these mechanisms can be described quantitatively using stochastic master-equation modelling; in this paper we study a generic gene-expression model of this kind which explicitly includes the representations of the processes of transcription and translation. For this model we determine the generating function of the steady-state distribution of mRNA and protein counts and characterise the underlying probability law using a combination of analytic, asymptotic and numerical approaches, finding that the distribution may assume a number of qualitatively distinct forms. The results of the analysis are suitable for comparison with single-molecule resolution gene-expression data emerging from recent experimental studies.
机译:在单细胞水平上的基因表达结合了本质上是随机的反应机制,因为它们涉及以低拷贝数存在的分子种类。可以使用随机主方程模型定量地描述这些机制的动力学。在本文中,我们研究了这种通用的基因表达模型,该模型明确包括转录和翻译过程的表示。对于此模型,我们确定了mRNA和蛋白质计数的稳态分布的生成函数,并使用分析,渐进和数值方法的组合来表征潜在的概率定律,发现该分布可以假定为许多定性不同的形式。分析的结果适合与来自最近的实验研究的单分子分辨率基因表达数据进行比较。

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  • 来源
    《Journal of Mathematical Biology》 |2012年第5期|p.829-854|共26页
  • 作者单位

    Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, NG7 2RD, UK;

    Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, NG7 2RD, UK;

    Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, NG7 2RD, UK;

    Institute of Genetics, Queen’s Medical Centre, University of Nottingham, Nottingham, NG7 2UH, UK;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Stochastic modelling; Gene expression; Master equation; Generating function; 92C40; 60J27;

    机译:随机建模;基因表达;主方程;生成函数;92C40;60J27;

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