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High-Resolution Solid-State NMR Structure of a 17.6 kDa Protein

机译:17.6 kDa蛋白的高分辨率固态NMR结构

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摘要

Abstract: The use of pseudocontact shifts arising from paramagnetic metal ions in a microcrystalline proteinsample is proposed as a strategy to obtain unambiguous signal assignments in solid-state NMR spectrnenabling distance extraction for protein structure calculation. With this strategy, 777 unambiguous (28nsequential, 217 medium-range, and 279 long-range) distance restraints could be obtained from PDSDnDARR, CHHC, and the recently introduced PAR and PAIN-CP solid-state experiments for the cobalt(IInsubstituted catalytic domain of matrix metalloproteinase 12 (159 amino acids, 17.6 kDa). The obtainenstructure is a high resolution one, with backbone rmsd of 1.0 0.2 Å, and is in good agreement with thnX-ray structure (rmsd to X-ray 1.3 Å). The proposed strategy, which may be generalized for nonmetallonproteins with the use of paramagnetic tags, represents a significant step ahead in protein structurndetermination using solid-state NMR.
机译:摘要:提出了利用微晶蛋白质样品中顺磁性金属离子产生的伪接触位移作为在固态NMR支持距离提取以进行蛋白质结构计算中获得明确信号分配的策略。通过这种策略,可以从PDSDnDARR,CHHC以及最近引入的PAR和PAIN-CP固态钴(IIn取代的催化域)固态实验中获得777个明确的(28ns顺序,217个中程和279个远程)距离限制。基质金属蛋白酶12(159个氨基酸,17.6 kDa)的结构,获得的结构是高分辨率的,主链rmsd为1.0 0.2Å,与thnX射线结构(rmsd至X射线1.3Å)非常吻合。拟议的策略(可利用顺磁性标签广泛用于非金属蛋白)代表了使用固态NMR在蛋白质结构鉴定中的重要一步。

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  • 来源
    《Journal of the American Chemical Society》 |2010年第3期|p.1032-1040|共9页
  • 作者单位

    Magnetic Resonance Center, CERM, Uni ersity of Florence, Via L. Sacconi,6 - 50019 Sesto Fiorentino, Italy, Department of Chemistry, Uni ersity of Florence, Via dellaLastruccia, 3 - 50019 Sesto Fiorentino, Italy, Department of Chemistry and Francis Bitter MagnetLaboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, andDepartment of Agricultural Biotechnology, Uni ersity of Florence, Via Maragliano,75-77 - 50144 Florence, Italy;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
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  • 正文语种 eng
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