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首页> 外文期刊>International journal of plant sciences >MOLECULAR PHYLOGENETICS OF LIGUSTICUM (APIACEAE) BASED ON NR DNA ITS SEQUENCES: RAMPANT POLYPHYLY, PLACEMENT OF THE CHINESE ENDEMIC SPECIES, AND A MUCH-REDUCED CIRCUMSCRIPTION OF THE GENUS
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MOLECULAR PHYLOGENETICS OF LIGUSTICUM (APIACEAE) BASED ON NR DNA ITS SEQUENCES: RAMPANT POLYPHYLY, PLACEMENT OF THE CHINESE ENDEMIC SPECIES, AND A MUCH-REDUCED CIRCUMSCRIPTION OF THE GENUS

机译:基于NR DNA的甘草的分子系统遗传学序列:猛禽多形性,中国特有种的分布和种类的减少

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摘要

Premise of research. Earlier molecular systematic studies revealed that the genus Ligusticum is polyphyletic, with its members allied with representatives of several other genera in five clades of Apiaceae subfamily Apioideae. These studies included only a small sampling of Ligusticum species and its putative allies, including those from the Hengduan Mountains of southwestern China, a major distribution center for the genus. The proper circumscription of the genus, the placement and phylogenetic relationships among those species hitherto accommodated in Ligusticum, and the relationships among the Chinese endemic species have been elusive. Methodology. Internal transcribed spacer (ITS) sequences were obtained from 103 accessions of Ligusticum and its putative allies, representing the most comprehensive sampling of Ligusticum to date (46 species). These data, along with published ITS sequences from selected Apioideae (for a total of 2911 accessions), were subjected to a maximum likelihood analysis. Pivotal results. Besides the five clades to which Ligusticum has been referred previously (Acronema clade, Conioselinum chinense clade, Pyramidoptereae, Selineae, and Sinodielsia clade), two members allied with the East-Asia (Physospermopsis) clade. Most Chinese endemic Ligusticum species (plus members of other polyphyletic genera, such as Cortiella, Ligusticopsis, and Oreocome) fell within the Chinese Ligusticum clade of tribe Selineae. All North American species of Ligusticum except L. scoticum (the generic type) occur within the North American Ligusticum clade (the previously recognized Conioselinum chinense clade). Excluding the monotypic Para-ligusticum and Rupiphila, many Eurasian genera putatively allied with Ligusticum s.lat. (such as Cnidium, Hymenidium, Ligusticopsis, Pachypleurum, Selinum, and Tilingia) are polyphyletic, and none ally with Ligusticum s.s. Conclusions. Ligusticum s.s., placed in the Acronema clade, is reduced to comprise only two species: L. scoticum (with subspecies scoticum and hultenii) and L. holopetalum. Relationships among those other species traditionally accommodated in Ligusticum, especially those of the Chinese Ligusticum clade, are far more complex than previously realized and will require further study utilizing the framework phylogeny presented herein before their taxonomy can be revised to reflect evolutionary relationships.
机译:研究前提。较早的分子系统研究表明,女贞属是多系属的,其成员与蚜虫科亚科Apioideae的五个进化枝中的其他几个属的代表结盟。这些研究仅包括一小部分女贞属及其推定的盟友,包括来自中国西南部横断山脉的一类主要分布中心。迄今仍在女贞属中生活的这些物种的属的正确界限,位置和系统发育关系以及中国特有物种之间的关系都难以捉摸。方法。内部转录间隔区(ITS)序列是从103份女贞及其推测的同盟中获得的,代表了迄今为止最全面的女贞样品(46种)。将这些数据,与来自选定蚜虫科的已发布ITS序列(共2911个入藏)一起,进行了最大似然分析。关键的结果。除了先前提到的女贞属的五个进化枝(棘皮虫进化枝,中华龙骨的进化枝,锥翅类,剑兰和中华球菌的进化枝)外,还有两个与东亚(草皮植物)进化枝相关的成员。大多数中国特有的女贞属物种(加上其他多谱属的成员,如Cortiella,女贞属和奥利康姆)都属于中国女贞属部落Selineae进化枝。除狼尾草(L. scoticum)(通用型)以外,北美的所有女贞属物种都在北美女贞属进化枝(先前公认的中国鸡骨草)中发生。除了单型的Para-ligusticum和Rupiphila,许多欧亚属都被认为与Ligusticum s.lat有关。 (例如Cnidium,Hymenidium,Ligusticopsis,Pachypleurum,Selinum和Tilingia)是多系的,与Ligusticum s.s没有同盟。结论。放置在Acronema进化枝中的女贞被还原为仅包含两个物种:子叶乳杆菌(具有亚种scoticum和hultenii)和holoptalum。传统上被安放在女贞属中的其他物种之间的关系,特别是中国女贞属进化枝中的物种,比以前意识到的要复杂得多,在修改其分类学以反映进化关系之前,需要利用本文介绍的系统发育框架进行进一步的研究。

著录项

  • 来源
    《International journal of plant sciences 》 |2020年第3期| 306-323| 共18页
  • 作者单位

    School of Pharmaceutical Science and Yunnan Key Laboratory of Pharmacology for Natural Products Kunming Medical University 1168 Western Chunrong Road Yuhua Street Chenggong New City Kunming 650500 China;

    Chinese Academy of Sciences Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of Botany Chinese Academy of Sciences Kunming 650201 China;

    Department of Plant Biology University of Illinois at Urbana-Champaign Urbana Illinois 61801 USA;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Ligusticum; phylogeny; ITS; Apiaceae subfamily Apioideae;

    机译:女贞;系统发育它的;pi科亚科;

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