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A Dictionary-Based Approach for Identifying Biomedical Concepts

机译:基于字典的生物医学概念识别方法

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摘要

In this research, we provided a dictionary-based approach for identifying biomedical concepts from the literature. The approach first crawled experimental corpus by E-utilities and built a concept dictionary. Then, we developed an algorithm called Variable-step Window Identification Algorithm (VWIA) for matching biomedical concepts based on preprocessing, POS tagging and the formation of phrase block. The approach could identify embedded biomedical concepts and new concepts, which could identify concepts more completely. The proposed approach obtain 95.0% F-measure overall for the test dataset. Thus, it is promising for the method of biomedical text mining.
机译:在这项研究中,我们提供了一种基于字典的方法来从文献中识别生物医学概念。该方法首先通过E-utilities检索了实验语料库,并建立了概念词典。然后,我们开发了一种称为可变步窗识别算法(VWIA)的算法,用于基于预处理,POS标记和短语块的形成来匹配生物医学概念。该方法可以识别嵌入式生物医学概念和新概念,从而可以更完整地识别概念。所提出的方法为测试数据集整体获得95.0%的F度量。因此,对于生物医学文本挖掘方法是有希望的。

著录项

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  • 作者单位

    Nanjing Univ Posts & Telecommun, Coll Comp Sci & Technol, Jiangsu High Technol Res Key Lab Wireless Sensor, Jiangsu Key Lab Big Data Secur & Intelligent Proc, Nanjing 210003, Jiangsu, Peoples R China;

    Jinling Inst Technol, Coll Intelligent Sci & Control Engn, Nanjing 211169, Jiangsu, Peoples R China;

    Nanjing Univ Posts & Telecommun, Coll Comp Sci & Technol, Jiangsu High Technol Res Key Lab Wireless Sensor, Jiangsu Key Lab Big Data Secur & Intelligent Proc, Nanjing 210003, Jiangsu, Peoples R China;

    Zhongxing Telecommun Equipment Corp, Shenzhen 518057, Peoples R China;

    Zhongxing Telecommun Equipment Corp, Shenzhen 518057, Peoples R China;

    Nanjing Univ Posts & Telecommun, Coll Comp Sci & Technol, Jiangsu High Technol Res Key Lab Wireless Sensor, Jiangsu Key Lab Big Data Secur & Intelligent Proc, Nanjing 210003, Jiangsu, Peoples R China;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Biomedical text mining; concept recognition; VWIA algorithm; dictionary-based apporach;

    机译:生物医学文本挖掘;概念识别;VIA算法;基于字典的方法;

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