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Knowledge-based query expansion to support scenario-specific retrieval of medical free text

机译:基于知识的查询扩展,以支持特定于场景的医疗免费文本检索

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摘要

In retrieving medical free text, users are often interested in answers pertinent to certain scenarios that correspond to common tasks performed in medical practice, e.g., treatment or diagnosi s of a disease. A major challenge in handling such queries is that scenario terms in the query (e.g., treatment) are often too general to match specialized terms in relevant documents (e.g., chemotherapy). In this paper, we propose a knowledge-based query expansion method that exploits the UMLS knowledge source to append the original query with additional terms that are specifically relevant to the query's scenario(s). We compared the proposed method with traditional statistical expansion that expands terms which are statistically correlated but not necessarily scenario specific. Our study on two standard testbeds shows that the knowledge-based method, by providing scenario-specific expansion, yields notable improvements over the statistical method in terms of average precision-recall. On the OHSUMED testbed, for example, the improvement is more than 5% averaging over all scenario-specific queries studied and about 10% for queries that mention certain scenarios, such as treatment of a disease and differential diagnosis of a symptom/disease.
机译:在检索医学自由文本时,用户通常对与某些场景有关的答案感兴趣,这些场景对应于医学实践中执行的常见任务,例如疾病的治疗或诊断。处理此类查询的主要挑战是查询中的方案术语(例如治疗)通常过于笼统而无法匹配相关文档(例如化学疗法)中的专门术语。在本文中,我们提出了一种基于知识的查询扩展方法,该方法利用UMLS知识源在原始查询中附加与查询场景特别相关的其他术语。我们将提出的方法与传统的统计扩展进行了比较,传统的统计扩展扩展了统计相关但不一定特定于场景的术语。我们对两个标准测试平台的研究表明,基于知识的方法,通过提供特定于场景的扩展,相对于平均精度调用方面的统计方法而言,产生了显着的改进。例如,在OHSUMED测试平台上,在所研究的所有特定于场景的查询中,平均改进超过5%,而对于提及某些特定场景(例如疾病的治疗和症状/疾病的鉴别诊断)的查询,平均提高了约10%。

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