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A Potential Causal Association Mining Algorithm for Screening Adverse Drug Reactions in Postmarketing Surveillance

机译:在上市后监视中筛选药物不良反应的潜在因果关联挖掘算法

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Early detection of unknown adverse drug reactions (ADRs) in postmarketing surveillance saves lives and prevents harmful consequences. We propose a novel data mining approach to signaling potential ADRs from electronic health databases. More specifically, we introduce potential causal association rules (PCARs) to represent the potential causal relationship between a drug and ICD-9 (CDC. (2010). International Classification of Diseases, Ninth Revision (ICD-9). [Online]. Available: http://www.cdc.govchs/icd/icd9.html) coded signs or symptoms representing potential ADRs. Due to the infrequent nature of ADRs, the existing frequency-based data mining methods cannot effectively discover PCARs. We introduce a new interestingness measure, potential causal leverage, to quantify the degree of association of a PCAR. This measure is based on the computational, experience-based fuzzy recognition-primed decision (RPD) model that we developed previously (Y. Ji, R. M. Massanari, J. Ager, J. Yen, R. E. Miller, and H. Ying, “A fuzzy logic-based computational recognition-primed decision model,” Inf. Sci., vol. 177, pp. 4338–4353, 2007) on the basis of the well-known, psychology-originated qualitative RPD model (G. A. Klein, “A recognition-primed decision making model of rapid decision making,” in Decision Making in Action: Models and Methods, 1993, pp. 138–147). The potential causal leverage assesses the strength of the association of a drug–symptom pair given a collection of patient cases. To test our data mining approach, we retrieved electronic medical data for 16 206 patients treated by one or more than eight drugs of our interest at the Veterans Affairs Medical Center in Detroit between 2007 and 2009. We selected enalapril as the target drug for this ADR signal generation study. We used our algorithm to preliminarily evaluate the associations between enalapril and all the ICD-9 codes associated with it. The experimental results indicate that our approach has a potential to better signal potential ADRs than risk ratio and leverage, two traditional frequency-based measures. Among the top 50 signal pairs (i.e., enalapril versus symptoms) ranked by the potential causal-leverage measure, the physicians on the project determined that eight of them probably represent true causal associations.
机译:在售后监测中及早发现未知的不良药物反应(ADR)可以挽救生命并防止有害后果。我们提出了一种新颖的数据挖掘方法来发信号通知来自电子健康数据库的潜在ADR。更具体地说,我们引入了潜在因果关联规则(PCAR)来表示药物与ICD-9之间的潜在因果关系(CDC。(2010)。国际疾病分类,第九次修订版(ICD-9)。[在线])。 :http://www.cdc.govchs/icd/icd9.html)编码的代表潜在ADR的标志或症状。由于ADR的罕见性,现有的基于频率的数据挖掘方法无法有效地发现PCAR。我们引入了一种新的兴趣度度量,即潜在的因果杠杆作用,以量化PCAR的关联度。此度量基于我们先前开发的基于计算的基于经验的模糊识别主导决策(RPD)模型(Y. Ji,RM Massanari,J。Ager,J。Yen,RE Miller和H. Ying,“基于模糊逻辑的基于计算识别的决策模型,” Inf。Sci。,第177卷,第4338–4353页,2007年),是基于众所周知的基于心理学的定性RPD模型(GA Klein,“ A快速决策的基于认知的决策模型”,《行动中的决策:模型与方法》,1993年,第138-147页。潜在的因果关系评估了在给定患者病例的情况下一对药物-症状对的关联强度。为了测试我们的数据挖掘方法,我们在2007年至2009年之间在底特律的退伍军人事务医疗中心检索了16206名患者的电子医学数据,这些患者接受了我们感兴趣的一种或八种以上药物治疗。我们选择依那普利作为该ADR的目标药物信号产生研究。我们使用我们的算法初步评估了依那普利和与其相关的所有ICD-9代码之间的关联。实验结果表明,与两种基于频率的传统衡量指标风险率和杠杆率相比,我们的方法具有更好地发出潜在ADR信号的潜力。在按潜在因果杠杆量度排序的前50个信号对(即依那普利与症状对)中,该项目的医生确定其中八个可能代表了真正的因果关系。

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