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Species identification of imported and Japanese commercial green algal products based on phylogenetic analyses using the nrITS2 and 5S rDNA spacer regions

机译:基于使用nrITS2和5S rDNA间隔区的系统发育分析,对进口和日本商品绿色藻类产品进行物种鉴定

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摘要

The identification of imported green algal products represents a critical challenge to the Japanese Customs Service in terms of ensuring effective control of imported quota items (species of genera Monostroma and Enteromorpha and their products). To assist officials in this difficult task, we tested the applicability of phylogenetic analyses using the nuclear-encoded ribosomal DNA internal transcribed spacer 2 (nrITS2) and 5S ribosomal DNA (rDNA) spacer regions to identify green algal products at the species level. Our nrITS2-based phylogenetic analysis was able to roughly separate the Ulva-related samples into three clades: the Ulva linza–procera–prolifera (LPP) complex and two other clades, and identified the Monostroma-related samples as M. nitidum. Subsequent detailed analysis within the LPP complex using the 5S rDNA spacer region divided the samples into two groupings (the U. linza clade and U. prolifera clade), while it detected possible hybrid samples of U. linza and U. prolifera from a number of commercial green algal products.
机译:在确保有效控制进口配额项目(Monostroma和Enteromorpha属的物种)及其产品方面,进口绿色藻类产品的识别对日本海关总署构成了严峻挑战。为了协助官员完成这项艰巨的任务,我们使用核编码的核糖体DNA内部转录间隔区2(nrITS2)和5S核糖体DNA(rDNA)间隔区测试了系统发育分析的适用性,以在物种水平上鉴定绿色藻类产品。我们基于nrITS2的系统发育分析能够将Ulva相关样本大致分为三个进化枝:Ulva linza-procera-prolifera(LPP)复合体和另外两个进化枝,并将Monostroma相关样本鉴定为nit.um。随后使用5S rDNA间隔区对LPP复合体进行详细分析,将样品分为两个组(U. linza进化枝和U. prolifera进化枝),同时它从多个基因组中检测到了U. linza和U. prolifera杂种。商业绿色藻类产品。

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