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Strided fully convolutional neural network for boosting the sensitivity of retinal blood vessels segmentation

机译:跨层全卷积神经网络,提高视网膜血管分割的敏感性

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In this paper, a deep convolutional neural network (CNN) is proposed for accurate segmentation of retinal blood vessels. This method plays a significant role in observing many eye diseases. A strided-CNN model is proposed for accurate segmentation of retinal vessels, especially the tiny vessels. The model is a fully convolutional model consisting of an encoder part and a decoder part where the pooling layers are replaced with strided convolutional layers. The strided convolutional layer approach was chosen over the pooling layers approach as the former can be trained. The morphological mappings along with the Principal Component Analysis (PCA)- based pre-processing steps are used to generate contrast images for training dataset. Skip connections are implemented to concatenate features from the encoder part and the decoder part to enhance the vessels segmentation especially the tiny vessels and to make the vessel's edges sharper. We used a class balancing loss function to train and optimize the proposed model to improve vessel image quality. The impact of the proposed segmentation method is evaluated on four databases namely DRIVE, STARE, CHASE-DB1 and HRF. Overall model performance, particularly with respect to tiny vessels, is primarily influenced by sensitivity and accuracy metrics. We demonstrate that our model outperforms other models with a sensitivity of 0.87, 0.808, 0.886 and 0.829 on DRIVE, STARE, CHASE_DBI and HRF respectively, along with respective accuracies of 0.956, 0.954, 0.976 and 0.962. (C) 2019 Elsevier Ltd. All rights reserved.
机译:本文提出了一种深度卷积神经网络(CNN),用于视网膜血管的精确分割。该方法在观察许多眼疾中起着重要作用。提出了跨步神经网络模型,用于视网膜血管,尤其是细血管的精确分割。该模型是完全卷积模型,由编码器部分和解码器部分组成,其中合并层被跨步卷积层代替。由于可以训练前者,因此选择了大步卷积层方法而不是合并层方法。形态映射以及基于主成分分析(PCA)的预处理步骤用于生成训练数据集的对比图像。实施跳过连接以连接编码器部分和解码器部分的特征,以增强血管分割,尤其是细小的血管,并使血管的边缘更锐利。我们使用类平衡损失函数来训练和优化所提出的模型,以提高血管图像质量。在四个数据库(即DRIVE,STARE,CHASE-DB1和HRF)上评估了所提出的分割方法的影响。总体模型性能(尤其是对于细小的容器)的性能主要受灵敏度和准确性指标的影响。我们证明,我们的模型在DRIVE,STARE,CHASE_DBI和HRF上的灵敏度分别为0.87、0.808、0.886和0.829,优于其他模型,并且各自的精度分别为0.956、0.954、0.976和0.962。 (C)2019 Elsevier Ltd.保留所有权利。

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