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Simplifying computational workflows with the Multiscale Atomic Zeolite Simulation Environment (MAZE)

机译:使用多尺度原子沸石仿真环境(迷宫)简化计算工作流程

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Zeolites, an important class of 3-dimensional nanoporous materials, have been widely explored for a variety of applications including gas storage, separations, and catalysis. As the properties of these aluminosilicate materials depend on a number of factors (e.g., framework topology, Si/Al ratio, extra-framework cations etc.), detailed experiments (e.g., catalytic properties, adsorption capacities etc.) are often limited to only a handful of materials. Computational methods have played an important role in (1) providing molecular level insights to rationalize experimental observations, and (2) screening large libraries of zeolites to identify promising candidates for experimental synthesis and validation. Different levels of theory and computational chemistry codes are necessary to describe the range of relevant phenomena such as adsorption (e.g., grand canonical Monte Carlo), diffusion (e.g., molecular dynamics), and chemical reactions (e.g., density functional theory). Manipulation of atomic structures, handling of input files, and developing robust workflows becomes quite cumbersome. To mitigate these challenges, we describe the development of the Multiscale Atomic Zeolite Simulation Environment (MAZE) – a Python package that simplifies zeolite-specific calculation workflows by providing a user-friendly interface for systematically manipulating zeolite structures.
机译:Zeolites是一类重要的三维纳米多孔材料,已被广泛探索各种应用,包括储气,分离和催化。随着这些铝硅酸盐材料的性质取决于许多因素(例如,框架拓扑,Si / Al比,框架阳离子等),通常仅限于的详细实验(例如,催化性质,吸附容量等)少数材料。计算方法在(1)中发挥了重要作用,提供了将实验性观察的分子水平见解,(2)筛选沸石的大型文库以确定实验合成和验证的有希望的候选者。不同程度的理论和计算化学代码是描述相关现象的范围,例如吸附(例如,大规范蒙特卡洛),扩散(例如,分子动力学)和化学反应(例如,密度函数理论)。操纵原子结构,输入文件处理以及开发的强大工作流程变得非常麻烦。为了减轻这些挑战,我们描述了多尺度原子沸石仿真环境(迷宫)的开发 - 一种通过提供用户友好的界面来简化特定于沸石的计算工作流程的Python包,用于系统地操纵沸石结构。

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