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A 2D–3D hybrid convolutional neural network for lung lobe auto-segmentation on standard slice thickness computed tomography of patients receiving radiotherapy

机译:一种2D-3D混合卷积神经网络,用于肺叶自动分割对接受放射治疗的患者标准切片厚度计算断层扫描

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Accurate segmentation of lung lobe on routine computed tomography (CT) images of locally advanced stage lung cancer patients undergoing radiotherapy can help radiation oncologists to implement lobar-level treatment planning, dose assessment and efficacy prediction. We aim to establish a novel 2D–3D hybrid convolutional neural network (CNN) to provide reliable lung lobe auto-segmentation results in the clinical setting. We retrospectively collected and evaluated thorax CT scans of 105 locally advanced non-small-cell lung cancer (NSCLC) patients treated at our institution from June 2019 to August 2020. The CT images were acquired with 5?mm slice thickness. Two CNNs were used for lung lobe segmentation, a 3D CNN for extracting 3D contextual information and a 2D CNN for extracting texture information. Contouring quality was evaluated using six quantitative metrics and visual evaluation was performed to assess the clinical acceptability. For the 35 cases in the test group, Dice Similarity Coefficient (DSC) of all lung lobes contours exceeded 0.75, which met the pass criteria of the segmentation result. Our model achieved high performances with DSC as high as 0.9579, 0.9479, 0.9507, 0.9484, and 0.9003 for left upper lobe (LUL), left lower lobe (LLL), right upper lobe (RUL), right lower lobe (RLL), and right middle lobe (RML), respectively. The proposed model resulted in accuracy, sensitivity, and specificity of 99.57, 98.23, 99.65 for LUL; 99.6, 96.14, 99.76 for LLL; 99.67, 96.13, 99.81 for RUL; 99.72, 92.38, 99.83 for RML; 99.58, 96.03, 99.78 for RLL, respectively. Clinician's visual assessment showed that 164/175 lobe contours met the requirements for clinical use, only 11 contours need manual correction. Our 2D–3D hybrid CNN model achieved accurate automatic segmentation of lung lobes on conventional slice-thickness CT of locally advanced lung cancer patients, and has good clinical practicability.
机译:肺叶对常规计算断层扫描(CT)图像的准确分割局部晚期肺癌患者进行放疗的患者可以帮助辐射肿瘤医学家实施洛巴尔级治疗规划,剂量评估和功效预测。我们的目标是建立一个新的2D-3D杂交卷积神经网络(CNN),以提供可靠的肺叶自动分段导致临床环境。从2019年6月到2020年6月到2020年,我们回顾性地收集和评估了105局局部晚期非小细胞肺癌(NSCLC)患者的胸部CT扫描。CT图像以5?mm切片厚度获得。两个CNN用于肺瓣分割,用于提取3D上下文信息的3D CNN和用于提取纹理信息的2D CNN。使用六种定量度量评估轮廓质量,并进行视觉评估以评估临床可接受性。对于试验组的35例,所有肺裂片轮廓的骰子相似度系数(DSC)超过0.75,符合分段结果的通过标准。我们的模型具有高达0.9579,0.9479,0.9507,0.9484和0.9003的DSC的高性能,左上叶(LUL),左下叶(LLL),右上叶(RUL),右下叶(RLL),以及右中瓣(RML)分别。拟议的模型导致LUL的精确度,敏感性和99.57,98.23,99.65的特异性; 99.6,96.14,99.76为lll; 99.67,96.13,99.81为rul; RML 99.72,92.38,99.83; 99.58,96.03,99.78分别为RLL。临床医生的视觉评估表明,164/175叶轮廓符合临床用途的要求,只需11轮廓需要手动校正。我们的2D-3D杂交CNN模型在局部晚期肺癌患者的常规切片厚度CT上实现了肺裂隙的准确自动细分,具有良好的临床实用性。

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