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首页> 外文期刊>Journal of Cancer >Genetic alteration and clinical significance of SUMOylation regulators in multiple cancer types
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Genetic alteration and clinical significance of SUMOylation regulators in multiple cancer types

机译:多种癌症类型中雄性调节剂的遗传改变及临床意义

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The purpose of this study was to investigate the genetic variation, gene expression differences, and clinical significance of SUMOylation regulators in pan-cancers. Based on previous studies, we gained a better understanding of the biological process of SUMOylation and the status of current research. In the present study, we employed a wide range of bioinformatics methods. We used genetic variation and mRNA expression data in the Cancer Genome Atlas (TCGA) to construct a panoramic view of the single nucleotide variants, copy number variants, and gene expression changes in SUMOylation regulators in various tumors. Subsequently, we used the String website and the Cytoscape tool to construct the PPI network between these regulators. We used the GSCALite website to determine the relationship between these regulators and cancer pathways and drug sensitivity. We constructed images of co-expression between these regulators using the R programming language. Using clinical data from TCGA, we performed hazard ratio analysis for these regulators in pan-cancer. Most importantly, we used these regulators to successfully establish risk signatures related to patient prognosis in multiple tumors. Finally, in KIRC, we conducted gene-set enrichment analysis (GSEA) of the five molecules in its risk signatures. We found that these five molecules are involved in multiple cancer pathways. In short, we have comprehensively interpreted the detailed biological process of SUMOylation at the genetic level for the first time, successfully constructed multiple risk signatures, and conducted GSEA in KIRC. We believe that these findings provide credible and valuable information that is relevant for future clinical diagnoses and scientific research.? The author(s).
机译:本研究的目的是探讨泛癌中雄性愈合调节剂的遗传变异,基因表达差异和临床意义。基于以前的研究,我们更好地了解Sublation的生物过程和当前研究的地位。在本研究中,我们使用各种生物信息化方法。我们使用癌症基因组Atlas(TCGA)中的遗传变异和mRNA表达数据来构建各种肿瘤中雄性核苷酸变体,拷贝数变体和基因表达的全部视图。随后,我们使用字符串网站和Cytoscape工具来构建这些调节器之间的PPI网络。我们使用GScalite网站来确定这些调节剂与癌症途径与药物敏感性之间的关系。我们使用R编程语言构建了这些调节器之间的共同表达图像。使用来自TCGA的临床资料,我们对泛癌中这些调节剂进行了危险比分析。最重要的是,我们使用这些监管机构成功地建立了与多种肿瘤患者预后相关的风险签名。最后,在kirc中,我们在其风险签名中进行了五个分子的基因集浓缩分析(GSEA)。我们发现这五种分子参与了多种癌症途径。简而言之,我们首次综合地解释了遗传水平在遗传水平的详细生物过程,成功地构建了多种风险型,并在kirc中进行了GSEA。我们认为,这些调查结果提供了与未来临床诊断和科学研究相关的可信和有价值的信息。作者。

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