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首页> 外文期刊>Asian Pacific Journal of Cancer Prevention >Exploration of Molecular Mechanisms of Diffuse Large B-cell Lymphoma Development Using a Microarray
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Exploration of Molecular Mechanisms of Diffuse Large B-cell Lymphoma Development Using a Microarray

机译:微阵列弥漫性大型B细胞淋巴瘤发育的分子机制探讨

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Objective: We aimed to identify key genes, pathways and function modules in the development of diffuse large B-cell lymphoma (DLBCL) with microarray data and interaction network analysis. Methods: Microarray data sets for 7 DLBCL samples and 7 normal controls was downloaded from the Gene Expression Omnibus (GEO) database and differentially expressed genes (DEGs) were identified with Student's t-test. KEGG functional enrichment analysis was performed to uncover their biological functions. Three global networks were established for immune system, signaling molecules and interactions and cancer genes. The DEGs were compared with the networks to observe their distributions and determine important key genes, pathways and modules. Results: A total of 945 DEGs were obtained, 272 up-regulated and 673 down-regulated. KEGG analysis revealed that two groups of pathways were significantly enriched: immune function and signaling molecules and interactions. Following interaction network analysis further confirmed the association of DEGs in immune system, signaling molecules and interactions and cancer genes. Conclusions: Our study could systemically characterize gene expression changes in DLBCL with microarray technology. A range of key genes, pathways and function modules were revealed. Utility in diagnosis and treatment may be expected with further focused research.
机译:目的:我们旨在鉴定弥漫性大B细胞淋巴瘤(DLBCL)的关键基因,途径和功能模块,微阵列数据和交互网络分析。方法:7 DLBCL样品的微阵列数据集和7个正常对照从基因表达综合征(Geo)数据库,并用学生的T检验鉴定出差异表达的基因(DEGS)。进行Kegg功能富集分析以发现其生物学功能。为免疫系统,信号分子和相互作用和癌症基因建立了三个全局网络。将DEG与网络进行比较以观察其分布并确定重要的关键基因,途径和模块。结果:获得了945次,272℃上调,下调673次。 Kegg分析显示,两组途径显着富集:免疫功能和信号分子和相互作用。在相互作用网络分析之前进一步证实了DEGS在免疫系统中的关联,信号分子和相互作用和癌症基因。结论:我们的研究可以系统地表征DLBCL与微阵列技术的基因表达变化。揭示了一系列关键基因,途径和功能模块。可以预期进一步聚焦的研究,可以预期诊断和治疗的效用。

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