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On the Impact of High Performance Computing in Big Data Analytics for Medicine

机译:高效计算对医学大数据分析的影响

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High-Performance Computing (HPC) is a mature domain that proved to be critical in running largescale modelling and simulation using numerical models. The Big Data Analytics domain (BDA) hasbeen rapidly developed over the last decade to process vast amounts of data now being generated invarious fields. Data-intensive applications are needed in various fields of medicine and healthcareranges from advanced research, as genomics, proteomics, epidemiology, and systems biology, tomedical diagnosis and treatments, or to commercial initiatives to develop new drugs. BDA needs theinfrastructure and the fundamentals of HPC to face with the required computational challenges.There are important differences in the approaches of these two domains, those that are working inBDA focus on big data specific features such as Volume, Velocity, Variety, Veracity, and Value, whileHPC scientists tend to focus on Performance, Scaling, and Power efficiency of computations. In thispaper we intend to analyse the need of these two domains in the development of the future medicinethat is required to become at least Personalized, Predictive, Preventive, and Participatory.
机译:高性能计算(HPC)是一个成熟的域,其证明在使用数值模型运行大型环境建模和仿真方面是至关重要的。在过去十年中,大数据分析域(BDA)迅速开发,以处理现在产生的大量数据不变的字段。来自高级研究的各种医学和医疗机构,作为基因组学,蛋白质组学,流行病学和系统生物学,巨大的诊断和治疗,或商业举措,或者对开发新药物的商业举措,需要数据密集型应用。 BDA需要HPC与所需的计算挑战所面临的弗拉特菊结构和基础。这两个域的方法存在重要差异,那些正在努力工作的人侧重于大数据特定功能,如体积,速度,品种,准确性和价值,而HPC科学家倾向于专注于性能,缩放和计算的功率效率。在此纸纸中,我们打算分析这两个域在未来的Medicinethat开发中的需求,必须成为至少个性化,预测,预防和参与性。

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