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首页> 外文期刊>Parasites Vectors >Modeling horizontal gene transfer (HGT) in the gut of the Chagas disease vector Rhodnius prolixus
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Modeling horizontal gene transfer (HGT) in the gut of the Chagas disease vector Rhodnius prolixus

机译:暗氮疾病肠道肠道肠杆菌的水平基因转移(HGT)建模

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摘要

Background Paratransgenesis is an approach to reducing arthropod vector competence using genetically modified symbionts. When applied to control of Chagas disease, the symbiont bacterium Rhodococcus rhodnii, resident in the gut lumen of the triatomine vector Rhodnius prolixus (Hemiptera: Reduviidae), is transformed to export cecropin A, an insect immune peptide. Cecropin A is active against Trypanosoma cruzi, the causative agent of Chagas disease. While proof of concept has been achieved in laboratory studies, a rigorous and comprehensive risk assessment is required prior to consideration of field release. An important part of this assessment involves estimating probability of transgene horizontal transfer to environmental organisms (HGT). This article presents a two-part risk assessment methodology: a theoretical model predicting HGT in the gut of R. prolixus from the genetically transformed symbiont R. rhodnii to a closely related non-target bacterium, Gordona rubropertinctus, in the absence of selection pressure, and a series of laboratory trials designed to test the model. Results The model predicted an HGT frequency of less than 1.14 × 10-16 per 100,000 generations at the 99% certainty level. The model was iterated twenty times, with the mean of the ten highest outputs evaluated at the 99% certainty level. Laboratory trials indicated no horizontal gene transfer, supporting the conclusions of the model. Conclusions The model treats HGT as a composite event, the probability of which is determined by the joint probability of three independent events: gene transfer through the modalities of transformation, transduction, and conjugation. Genes are represented in matrices and Monte Carlo method and Markov chain analysis are used to simulate and evaluate environmental conditions. The model is intended as a risk assessment instrument and predicts HGT frequency of less than 1.14 × 10-16 per 100,000 generations. With laboratory studies that support the predictions of this model, it may be possible to argue that HGT is a negligible consideration in risk assessment of genetically modified R. rhodnii released for control of Chagas disease.
机译:背景技术划分是一种使用转基因共生的减少节肢动物载体能力的方法。当适用于控制Chagas疾病时,Symbiont Bacterium rhodnii,驻留在Trairiatomine载体rhodnius(Hemiptera:Reduviidae)的肠道腔内,转化为出口Cecropin A,一种昆虫免疫肽。 Cecropin A对抗蛋白酶瘤Cruzi,噬菌体疾病的致病剂。虽然在实验室研究中取得了概念证明,但在审议现场释放之前需要严格和全面的风险评估。该评估的重要部分涉及估计转基因水平转移到环境生物(HGT)的概率。本文提出了两件风险评估方法:从遗传转化的Symbiont R. rhodnii到密切相关的非靶细菌,Gordona rubropertinctus,在没有选择压力的情况下,预测HGT的理论模型和一系列设计用于测试该模型的实验室试验。结果模型在99%确定性水平下预测每10万代小于1.14×10-16的HGT频率。该模型被迭代了二十次,其中十个最高产出的平均值在99%的确定性水平评估。实验室试验表明没有水平基因转移,支持模型的结论。结论模型将HGT视为复合事件,其概率由三个独立事件的联合概率决定:基因通过转化,转导和缀合的方式转移。基因在基质中表示,Marte Carlo方法和Markov链分析用于模拟和评估环境条件。该模型旨在作为风险评估仪器,并预测每10万代每代小于1.14×10-16的HGT频率。通过支持该模型预测的实验室研究,可能认为HGT是对遗传修饰R. rhodnii释放用于控制Chagas疾病的遗传修饰的R. rhodnii的风险评估的可忽略不计的考虑因素。

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