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Dynamic changes in DNA methylation during embryonic and postnatal development of an altricial wild bird

机译:胚胎野生鸟类胚胎和产后开发期间DNA甲基化的动态变化

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DNA methylation could shape phenotypic responses to environmental cues and underlie developmental plasticity. Environmentally induced changes in DNA methylation during development can give rise to stable phenotypic traits and thus affect fitness. In the laboratory, it has been shown that the vertebrate methylome undergoes dynamic reprogramming during development, creating a critical window for environmentally induced epigenetic modifications. Studies of DNA methylation in the wild are lacking, yet are essential for understanding how genes and the environment interact to affect phenotypic development and ultimately fitness. Furthermore, our knowledge of the establishment of methylation patterns during development in birds is limited. We quantified genome‐wide DNA methylation at various stages of embryonic and postnatal development in an altricial passerine bird, the great tit Parus major . While, there was no change in global DNA methylation in embryonic tissue during the second half of embryonic development, a twofold increase in DNA methylation in blood occurred between 6 and 15?days posthatch. Though not directly comparable, DNA methylation levels were higher in the blood of nestlings compared with embryonic tissue at any stage of prenatal development. This provides the first evidence that DNA methylation undergoes global change during development in a wild bird, supporting the hypothesis that methylation mediates phenotypic development. Furthermore, the plasticity of DNA methylation demonstrated during late postnatal development, in the present study, suggests a wide window during which DNA methylation could be sensitive to environmental influences. This is particularly important for our understanding of the mechanisms by which early‐life conditions influence later‐life performance. While, we found no evidence for differences in genome‐wide methylation in relation to habitat of origin, environmental variation is likely to be an important driver of variation in methylation at specific loci.
机译:DNA甲基化可以塑造对环境提示的表型反应和下划线发育可塑性。在发育过程中DNA甲基化的环境诱导的变化可以产生稳定的表型性状,从而影响健身。在实验室中,已经表明,脊椎动物甲膜在开发过程中经历动态重编程,为环境诱导的外观遗传修饰创造了一个关键窗口。缺乏对DNA甲基化的研究缺乏,但对于了解基因和环境如何相互作用以影响表型发展和最终的健身是必不可少的。此外,我们在鸟类发育过程中建立甲基化模式的了解是有限的。我们在综合山雀鸟的胚胎和产后开发的各个阶段进行了全基因组DNA甲基化,巨大的山雀王位。虽然,在胚胎发育的下半部分在胚胎组织中全局DNA甲基化没有变化,但血液中的DNA甲基化的两倍增加在6和15?天posthatch之间。虽然与产前发育的任何阶段的胚胎组织相比,仍然没有直接可比较,但在雏鸟的血液中,DNA甲基化水平较高。这提供了第一种证据,即DNA甲基化在野生鸟类发育过程中经历全球变化,支持甲基化介导表型发育的假设。此外,在本研究中,在出生后缩短的DNA甲基化的可塑性表明,宽窗口在其中DNA甲基化可能对环境影响敏感。这对于我们对早期条件影响后生命绩效影响的机制尤为重要。虽然,我们发现没有关于栖息地的基因组甲基化的差异,环境变异可能是特定基因座在甲基化变异的重要驾驶员。

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