首页> 外文期刊>The biochemical journal >Substrate-binding recognition and specificity of trehalose phosphorylase from Schizophyllum commune examined in steady-state kinetic studies with deoxy and deoxyfluoro substrate analogues and inhibitors
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Substrate-binding recognition and specificity of trehalose phosphorylase from Schizophyllum commune examined in steady-state kinetic studies with deoxy and deoxyfluoro substrate analogues and inhibitors

机译:稳态动力学研究中使用脱氧和脱氧氟底物类似物和抑制剂检查了裂褶菌属海藻糖磷酸化酶的底物结合识别和特异性

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pTrehalose phosphorylase is a component of the α-d-glucopyranosyl α-d-glucopyranoside (α,α-trehalose)-degrading enzyme system in fungi and it catalyses glucosyl transfer from α,α-trehalose to phosphate with net retention of the anomeric configuration. The enzyme active site has no detectable affinity for α,α-trehalose in the absence of bound phosphate and catalysis occurs from the ternary complex. To examine the role of non-covalent enzyme—substrate interactions for trehalose phosphorylase recognition, we used the purified enzyme from iSchizophyllum commune/i and tested a series of incompetent structural analogues of the natural substrates and products as inhibitors of the enzyme. Equilibrium-binding constants (iK/isubi/sub) for deoxy- and deoxyfluoro derivatives of d-glucose show that loss of interactions with the 3-, 4- or 6-OH, but not the reactive 1- and the 2-OH, results in considerably (≥100-fold) weaker affinity for sugar-binding subsite +1, revealing the requirement for hydrogen bonding with hydroxyls, away from the site of chemical transformation to position precisely the d-glucose-leaving groupucleophile for catalysis. The high specificity of trehalose phosphorylase for the sugar aglycon during binding and conversion of O-glycosides is in contrast with the observed α-retaining phosphorolysis of α-d-glucose-1-fluoride (α-d-Glc-1-F) since the productive bonding capability of the fluoride-leaving group with subsite +1 is minimal. The specificity constant (19Msup?1/sup·ssup?1/sup) and catalytic-centre activity (0.1ssup?1/sup) for the reaction with α-d-Glc-1-F are 0.10- and 0.008-fold the corresponding kinetic parameters for the enzymic reaction with α,α-trehalose. The non-selective-inhibition profile for a series of inactive α-d-glycopyranosyl phosphates shows that the driving force for the binary-complex formation lies mainly in interactions of the enzyme with the phosphate group and suggests that hydrogen bonding with hydroxyl groups at the catalytic site (subsite ?1) contributes to catalysis by providing stabilization, which is specific to the transition state. Vanadate, a tight-binding phosphate mimic, inhibits the phosphorolysis of α-d-Glc-1-F by forming a ternary complex whose apparent dissociation constant of 120iμ/iM is approx. 160-fold greater than the dissociation constant of the same inhibitor complex with α,α-trehalose./p
机译:>海藻糖磷酸化酶是真菌中α-d-吡喃葡萄糖基α-d-吡喃葡萄糖苷(α,α-海藻糖)降解酶系统的组成部分,它催化从α,α-海藻糖到磷酸的糖基转移,净保留量为异头配置。在没有结合磷酸盐的情况下,酶活性位点对α,α-海藻糖没有可检测的亲和力,并且三元络合物发生了催化作用。为了检查非共价酶与底物之间的相互作用对海藻糖磷酸化酶识别的作用,我们使用了来自 Schizophyllum commune 的纯化酶,并测试了一系列天然底物和产物的无能结构类似物作为该抑制剂的抑制剂。酶。 d-葡萄糖的脱氧和脱氧氟衍生物的平衡结合常数( K i )显示与3-,4-或6-OH的相互作用丧失,但而不是反应性1-和2-OH,导致与糖结合位点+1的亲和力大大降低(≥100倍),这表明需要与羟基进行氢键键合,远离化学转化位点以精确定位d-葡萄糖离去基团/亲核试剂用于催化。海藻糖磷酸化酶对O-糖苷的结合和转化过程中的糖苷配基具有高特异性,这与观察到的α-d-葡萄糖-1-氟化物(α-d-Glc-1-F)的α保留磷酸分解相反。氟离去基团与亚位点+1的生产性结合能力最小。与α-反应的特异性常数(19M ?1 ·s ?1 )和催化中心活性(0.1s ?1 )。 d-Glc-1-F是与α,α-海藻糖进行酶促反应的相应动力学参数的0.10-和0.008倍。一系列非活性α-d-glycopyranosyl磷酸盐的非选择性抑制谱表明,二元复合物形成的驱动力主要在于酶与磷酸基团的相互作用,并表明氢与羟基上的羟基键合。催化位点(亚位β1)通过提供稳定化而有助于催化作用,该稳定化对于过渡态是特定的。钒酸盐(一种紧密结合的磷酸盐模拟物)通过形成三元复合物来抑制α-d-Glc-1-F的磷酸水解,该三元复合物的表观解离常数为120μM左右。比同一抑制剂与α,α-海藻糖的复合物的解离常数大160倍。

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