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首页> 外文期刊>Investigative ophthalmology & visual science >CTG18.1 Expansion is the Best Classifier of Late-Onset Fuchs' Corneal Dystrophy Among 10 Biomarkers in a Cohort From the European Part of Russia
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CTG18.1 Expansion is the Best Classifier of Late-Onset Fuchs' Corneal Dystrophy Among 10 Biomarkers in a Cohort From the European Part of Russia

机译:CTG18.1扩展是来自俄罗斯欧洲部分人群的10种生物标志物中晚发性Fuchs角膜营养不良的最佳分类

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Purpose : To assess the occurrence and diagnostic performance of nine single-nucleotide variants (SNVs) in the TCF4, SLC4A11, LOXHD1, and AGBL1 genes and the CTG18.1 trinucleotide repeat expansion in a Russian cohort of Fuchs' endothelial corneal dystrophy (FECD) patients. Methods : This retrospective case-control study included 100 patients diagnosed with FECD (cases) and 100 patients with cataracts (controls). Blood DNA was used to perform PCR and subsequent Sanger sequencing of rs613872 and rs17595731 in TCF4, c.99-100delTC, rs267607065, rs267607064, and rs267607066 in SLC4A11, rs113444922 in LOXHD1, and rs181958589 and rs185919705 in AGBL1. The number of CTG18.1 trinucleotide repeats was determined by a combination of conventional PCR or triplet primed PCR with fragment analysis. Results : At least one rs613872 marker allele was found in 78% of FECD patients and 21% of controls, and at least one rs17595731 marker allele was found in 14% and 2%, respectively. CTG18.1 trinucleotide expansion (40 repeats) was detected in 72% of FECD patients and 5% of controls. Marker alleles of the tested SNVs in SLC4A11, LOXHD1, and rs185919705 in AGBL1 were not found in our FECD cohort. One FECD patient carried the marker allele of the rs181958589 SNV. Analysis of the diagnostic performance of individual markers in TCF4 and their combinations showed that the CTG18.1 repeat expansion was the best classifier for FECD (AUC = 0.84). Conclusions : Patients carrying CTG18.1 repeat expansion constituted a high proportion of the Russian FECD cohort; therefore, this marker is suitable for development of diagnostic and therapeutic approaches.
机译:目的:评估俄罗斯队列中的Fuchs内皮角膜营养不良(FECD)中TCF4,SLC4A11,LOXHD1和AGBL1基因中9个单核苷酸变异(SNV)的发生和诊断性能以及CTG18.1三核苷酸重复扩增耐心。方法:这项回顾性病例对照研究包括100例被诊断为FECD的患者(病例)和100例白内障患者(对照)。使用血液DNA进行PCR和随后的Sanger测序,分别是TCF4中的rs613872和rs17595731,SLC4A11中的c.99-100delTC,rs267607065,rs267607064和rs267607066,LOXHD1中的rs113444922,AGBL1中的rs181958589和rs185919705。 CTG18.1三核苷酸重复序列的数量是通过常规PCR或三联体引物PCR与片段分析的组合确定的。结果:在78%的FECD患者和21%的对照组中至少发现了一个rs613872标记等位基因,分别在14%和2%的情况下发现了至少一个rs17595731标记等位基因。在72%的FECD患者和5%的对照组中检测到CTG18.1三核苷酸扩增(重复次数大于40)。在我们的FECD队列中未找到SLC4A11,LOXHD1和AGBL1中的rs185919705中已测试SNV的标记等位基因。一名FECD患者携带rs181958589 SNV的标记等位基因。对TCF4及其组合中单个标记物的诊断性能的分析表明,CTG18.1重复扩增是FECD的最佳分类器(AUC = 0.84)。结论:携带CTG18.1重复扩增的患者在俄罗斯FECD队列中占很高比例。因此,该标记物适合用于诊断和治疗方法的开发。

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