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首页> 外文期刊>Applied and Environmental Microbiology >Comparative, Collaborative, and On-Site Validation of a TaqMan PCR Method as a Tool for Certified Production of Fresh, Campylobacter-Free Chickens
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Comparative, Collaborative, and On-Site Validation of a TaqMan PCR Method as a Tool for Certified Production of Fresh, Campylobacter-Free Chickens

机译:TaqMan PCR方法的比较,协作和现场验证,可作为经认证生产新鲜无弯曲杆菌的鸡的工具

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Certified Campylobacter-free poultry products have been produced in Denmark since 2002, the first example of fresh (unprocessed and nonfrozen) chickens labeled “Campylobacter free.” This success occurred partly through use of a 4-hour gel-based PCR testing scheme on fecal swabs. In this study, a faster, real-time PCR approach was validated in comparative and collaborative trials, based on recommendations from the Nordic system for validation of alternative microbiological methods (NordVal). The comparative real-time PCR trial was performed in comparison to two reference culture protocols on naturally contaminated samples (99 shoe covers, 101 cloacal swabs, 102 neck skins from abattoirs, and 100 retail neck skins). Culturing included enrichment in both Bolton and Preston broths followed by isolation on Preston agar and mCCDA. In one or both culture protocols, 169 samples were identified as positive. The comparative trial resulted in relative accuracy, sensitivity, and specificity of 98%, 95%, and 97%, respectively. The collaborative trial included nine laboratories testing neck skin, cloacal swab, and shoe cover samples, spiked with low, medium, and high concentrations of Campylobacter jejuni. Valid results were obtained from six of the participating laboratories. Accuracy for high levels was 100% for neck skin and cloacal swab samples. For low levels, accuracy was 100% and 92% for neck skin and cloacal swab samples, respectively; however, detection in shoe cover samples failed. A second collaborative trial, with an optimized DNA extraction procedure, gave 100% accuracy results for all three spiking levels. Finally, on-site validation at the abattoir on a flock basis was performed on 400 samples. Real-time PCR correctly identified 10 of 20 flocks as positive; thus, the method fulfilled the NordVal validation criteria and has since been implemented at a major abattoir.
机译:自2002年以来,丹麦已生产出经认证的不含弯曲杆菌的家禽产品,这是标有“不含弯曲杆菌”的新鲜(未经加工和未冷冻的)鸡的首例。这种成功部分是通过在粪便拭子上使用基于凝胶的4小时PCR测试方案实现的。在这项研究中,根据北欧系统对替代微生物方法(NordVal)的验证,在比较和协作试验中验证了一种更快的实时PCR方法。与两种参考培养方案相比,对自然污染的样品(99个鞋套,101个泄殖腔拭子,102个屠宰场的颈部皮肤和100个零售的颈部皮肤)进行了实时PCR对比试验。培养包括在Bolton和Preston肉汤中富集,然后在Preston琼脂和mCCDA上分离。在一种或两种培养方案中,有169个样品被鉴定为阳性。对比试验的相对准确度,敏感性和特异性分别为98%,95%和97%。这项合作试验包括九个实验室,分别对颈部皮肤,泄殖腔拭子和鞋套样品进行测试,并掺入低,中和高浓度的空肠弯曲菌。从六个参与实验室获得了有效结果。颈部皮肤和泄殖腔拭子样品的高水平准确度为100%。对于低水平样品,颈部皮肤和泄殖腔拭子样品的准确度分别为100%和92%。但是,鞋套样品检测失败。第二项合作试验采用优化的DNA提取程序,在所有三个加标水平上均提供了100%的准确度结果。最终,对400个样品在鸡场进行了以羊群为基础的现场验证。实时荧光定量PCR正确地鉴定出20个鸡群中有10个为阳性。因此,该方法符合NordVal验证标准,此后已在主要屠宰场实施。

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