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Interleukin-27 is a novel candidate diagnostic biomarker for bacterial infection in critically ill children

机译:Interleukin-27是危重症儿童细菌感染的新型候选诊断生物标志物

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IntroductionDifferentiating between sterile inflammation and bacterial infection in critically ill patients with fever and other signs of the systemic inflammatory response syndrome (SIRS) remains a clinical challenge. The objective of our study was to mine an existing genome-wide expression database for the discovery of candidate diagnostic biomarkers to predict the presence of bacterial infection in critically ill children.MethodsGenome-wide expression data were compared between patients with SIRS having negative bacterial cultures (n = 21) and patients with sepsis having positive bacterial cultures (n = 60). Differentially expressed genes were subjected to a leave-one-out cross-validation (LOOCV) procedure to predict SIRS or sepsis classes. Serum concentrations of interleukin-27 (IL-27) and procalcitonin (PCT) were compared between 101 patients with SIRS and 130 patients with sepsis. All data represent the first 24 hours of meeting criteria for either SIRS or sepsis.ResultsTwo hundred twenty one gene probes were differentially regulated between patients with SIRS and patients with sepsis. The LOOCV procedure correctly predicted 86% of the SIRS and sepsis classes, and Epstein-Barr virus-induced gene 3 (EBI3) had the highest predictive strength. Computer-assisted image analyses of gene-expression mosaics were able to predict infection with a specificity of 90% and a positive predictive value of 94%. Because EBI3 is a subunit of the heterodimeric cytokine, IL-27, we tested the ability of serum IL-27 protein concentrations to predict infection. At a cut-point value of ≥5 ng/ml, serum IL-27 protein concentrations predicted infection with a specificity and a positive predictive value of >90%, and the overall performance of IL-27 was generally better than that of PCT. A decision tree combining IL-27 and PCT improved overall predictive capacity compared with that of either biomarker alone.ConclusionsGenome-wide expression analysis has provided the foundation for the identification of IL-27 as a novel candidate diagnostic biomarker for predicting bacterial infection in critically ill children. Additional studies will be required to test further the diagnostic performance of IL-27.The microarray data reported in this article have been deposited in the Gene Expression Omnibus under accession number {"type":"entrez-geo","attrs":{"text":"GSE4607","term_id":"4607"}}GSE4607.
机译:简介在重症发烧和全身性炎症反应综合征(SIRS)其他症状的重症患者中区分无菌炎症和细菌感染仍然是临床挑战。我们研究的目的是挖掘一个现有的全基因组表达数据库,以发现候选的诊断性生物标志物,以预测危重儿童的细菌感染情况。方法比较细菌培养阴性的SIRS患者的全基因组表达数据( n = 21)和败血症患者细菌培养阳性(n = 60)。对差异表达的基因进行留一法交叉验证(LOOCV)程序,以预测SIRS或败血症类别。比较101名SIRS患者和130名败血症患者的血清白细胞介素27(IL-27)和降钙素(PCT)浓度。所有数据均代表符合SIRS或败血症的标准的前24小时。结果212个基因探针在SIRS患者和败血症患者之间受到差异调节。 LOOCV程序正确地预测了86%的SIRS和败血症类别,并且爱泼斯坦-巴尔病毒诱导的基因3(EBI3)具有最高的预测强度。基因表达镶嵌的计算机辅助图像分析能够以90%的特异性和94%的阳性预测值预测感染。因为EBI3是异二聚体细胞因子IL-27的一个亚基,所以我们测试了血清IL-27蛋白浓度预测感染的能力。在临界点值≥5ng / ml时,血清IL-27蛋白浓度预测感染具有特异性,阳性预测值> 90%,并且IL-27的总体性能通常优于PCT。与单独使用任何一种生物标志物相比,结合了IL-27和PCT的决策树提高了整体预测能力。结论全基因组表达分析为鉴定IL-27作为预测重症细菌感染的新型候选诊断生物标志物奠定了基础。孩子们。将需要进一步的研究以进一步测试IL-27的诊断性能。本文报道的微阵列数据已保存在Gene Expression Omnibus中,登录号为{“ type”:“ entrez-geo”,“ attrs”:{ “ text”:“ GSE4607”,“ term_id”:“ 4607”}} GSE4607。

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