首页> 外文期刊>BMC Genomics >Mitochondrial genomes and comparative analyses of Culex camposi, Culex coronator, Culex usquatus and Culex usquatissimus (Diptera:Culicidae), members of the coronator group
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Mitochondrial genomes and comparative analyses of Culex camposi, Culex coronator, Culex usquatus and Culex usquatissimus (Diptera:Culicidae), members of the coronator group

机译:加冕者小组成员坎克斯库克斯(Culex camposi),库克斯(Culex)加冕者,库克斯(Culex usquatus)和库克斯(Culex usquatissimus)的线粒体基因组和比较分析

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The Coronator Group currently encompasses six morphologically similar species (Culex camposi Dyar, Culex coronator Dyar and Knab, Culex covagarciai Forattini, Culex usquatus Dyar, Culex usquatissimus Dyar, and Culex ousqua Dyar). Culex coronator has been incriminated as a potential vector of West Nile Virus (WNV), Saint Louis Encephalitis Virus (SLEV), and Venezuelan Equine Encephalitis Virus (VEEV). The complete mitochondrial genome of Cx. coronator, Cx. usquatus, Cx.usquatissimus, and Cx. camposi was sequenced, annotated, and analyzed to provide genetic information about these species. The mitochondrial genomes of Cx. coronator, Cx. usquatus, Cx.usquatissimus, and Cx. camposi varied from 15,573 base pairs in Cx. usquatus to 15,576 in Cx. coronator. They contained 37 genes (13 protein-encoding genes, 2 rRNA genes, and 22 tRNA genes) and the AT-rich control region. Comparative analyses of the 37 genes demonstrated the mitochondrial genomes to be composed of variable and conserved genes. Despite the small size, the ATP8, ATP6 plus NADH5 protein-encoding genes were polymorphic, whereas tRNAs and rRNAs were conserved. The control region contained some poly-T stretch. The Bayesian phylogenetic tree corroborated that both the Coronator Group and the Culex pipens complex are monophyletic taxa. The mitochondrial genomes of Cx. coronator, Cx. usquatus, Cx. usquatissimus and Cx. camposi share the same gene composition and arrangement features that match to those reported for most Culicidae species. They are composed of the same 37 genes and the AT-rich control region, which contains poly-T stretches that may be involved in the functional role of the mitochondrial genome. Taken together, results of the dN/dS ratios, the sliding window analyses and the Bayesian phylogenetic analyses suggest that ATP6, ATP8 and NADH5 are promising genes to be employed in phylogenetic studies involving species of the Coronator Group, and probably other species groups of the subgenus Culex. Bayesian topology corroborated the morphological hypothesis of the Coronator Group as monophyletic lineage within the subgenus Culex.
机译:加冕者小组目前包括六个形态相似的物种(库克斯坎波西·达亚尔,库克斯加冕者迪亚尔和纳布,库克斯库瓦加西亚·福拉蒂尼,库克斯库克斯·迪亚尔,库克斯库斯迪亚斯·迪亚尔和库克斯库·杜夸迪亚尔。库克斯加冕者被认为是西尼罗河病毒(WNV),圣路易斯脑炎病毒(SLEV)和委内瑞拉马脑炎病毒(VEEV)的潜在媒介。 Cx的完整线粒体基因组。加冕者,Cx。 usquatus,Cx.usquatissimus和Cx。对坎波西族进行了测序,注释和分析,以提供有关这些物种的遗传信息。 Cx的线粒体基因组。加冕者,Cx。 usquatus,Cx.usquatissimus和Cx。坎波西在Cx中有15,573个碱基对。在Cx中的使用量增加到15,576。加冕者。它们包含37个基因(13个蛋白质编码基因,2个rRNA基因和22个tRNA基因)和富含AT的控制区。对这37个基因的比较分析表明,线粒体基因组由可变的和保守的基因组成。尽管体积小,但ATP8,ATP6和NADH5蛋白编码基因还是多态的,而tRNA和rRNA却是保守的。对照区域包含一些poly-T拉伸。贝叶斯系统进化树证实了Coronator组和Culex Pipens复合体都是单系统分类群。 Cx的线粒体基因组。加冕者,Cx。 usquatus,Cx。 usquatissimus和Cx。坎波西拥有与大多数葫芦科物种相同的基因组成和排列特征。它们由相同的37个基因和富含AT的控制区域组成,该区域包含可能参与线粒体基因组功能的poly-T序列。总的来说,dN / dS比的结果,滑动窗口分析和贝叶斯系统发育分析表明,ATP6,ATP8和NADH5是有希望的基因,可用于涉及Coronator组物种以及可能的其他物种组的系统发育研究中。库克斯亚种。贝叶斯拓扑证实了加冕者组的形态假说是库莱克斯属下的单系谱系。

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