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首页> 外文期刊>BMC Genomics >Glycogenome expression dynamics during mouse C2C12 myoblast differentiation suggests a sequential reorganization of membrane glycoconjugates
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Glycogenome expression dynamics during mouse C2C12 myoblast differentiation suggests a sequential reorganization of membrane glycoconjugates

机译:小鼠C2C12成肌细胞分化过程中糖原基因组的表达动态表明膜糖缀合物的顺序重组

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Background Several global transcriptomic and proteomic approaches have been applied in order to obtain new molecular insights on skeletal myogenesis, but none has generated any specific data on glycogenome expression, and thus on the role of glycan structures in this process, despite the involvement of glycoconjugates in various biological events including differentiation and development. In the present study, a quantitative real-time RT-PCR technology was used to profile the dynamic expression of 375 glycogenes during the differentiation of C2C12 myoblasts into myotubes. Results Of the 276 genes expressed, 95 exhibited altered mRNA expression when C2C12 cells differentiated and 37 displayed more than 4-fold up- or down-regulations. Principal Component Analysis and Hierarchical Component Analysis of the expression dynamics identified three groups of coordinately and sequentially regulated genes. The first group included 12 down-regulated genes, the second group four genes with an expression peak at 24 h of differentiation, and the last 21 up-regulated genes. These genes mainly encode cell adhesion molecules and key enzymes involved in the biosynthesis of glycosaminoglycans and glycolipids (neolactoseries, lactoseries and ganglioseries), providing a clearer indication of how the plasma membrane and extracellular matrix may be modified prior to cell fusion. In particular, an increase in the quantity of ganglioside GM3 at the cell surface of myoblasts is suggestive of its potential role during the initial steps of myogenic differentiation. Conclusion For the first time, these results provide a broad description of the expression dynamics of glycogenes during C2C12 differentiation. Among the 37 highly deregulated glycogenes, 29 had never been associated with myogenesis. Their biological functions suggest new roles for glycans in skeletal myogenesis.
机译:背景技术为了获得关于骨骼肌发生的新分子见解,已经应用了几种全局转录组学和蛋白质组学方法,但是,尽管糖缀合物参与了糖基化组的表达,但是还没有关于糖基因组表达以及糖结构在此过程中的作用的任何具体数据。各种生物事件,包括分化和发育。在本研究中,使用实时定量RT-PCR技术分析了C2C12成肌细胞分化为肌管过程中375种糖基因的动态表达。结果在表达的276个基因中,当C2C12细胞分化时,有95个表现出改变的mRNA表达,而37个表现出超过4倍的上调或下调。表达动力学的主成分分析和层次成分分析确定了三组协调和顺序调控的基因。第一组包括12个下调基因,第二组四个在分化24 h时表达峰值的基因,最后21个上调基因。这些基因主要编码参与糖胺聚糖和糖脂生物合成的细胞粘附分子和关键酶(神经氨酸系列,乳酸序列和神经节系列),为细胞融合之前如何修饰质膜和细胞外基质提供了更清晰的指示。特别是,成肌细胞细胞表面神经节苷脂G M3 的数量增加表明它在成肌分化的初始阶段可能具有潜在作用。结论这些结果首次为C2C12分化过程中糖基因表达动态的广泛描述。在37种高度失调的糖原中,有29种从未与肌发生有关。它们的生物学功能表明聚糖在骨骼肌发生中的新作用。

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