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An online database for plant image analysis software tools

机译:用于植物图像分析软件工具的在线数据库

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Background Recent years have seen an increase in methods for plant phenotyping using image analyses. These methods require new software solutions for data extraction and treatment. These solutions are instrumental in supporting various research pipelines, ranging from the localisation of cellular compounds to the quantification of tree canopies. However, due to the variety of existing tools and the lack of central repository, it is challenging for researchers to identify the software that is best suited for their research. Results We present an online, manually curated, database referencing more than 90 plant image analysis software solutions. The website, plant-image-analysis.org, presents each software in a uniform and concise manner enabling users to identify the available solutions for their experimental needs. The website also enables user feedback, evaluations and new software submissions. Conclusions The plant-image-analysis.org database provides an overview of existing plant image analysis software. The aim of such a toolbox is to help users to find solutions, and to provide developers a way to exchange and communicate about their work.
机译:背景技术近年来,使用图像分析的植物表型鉴定方法有所增加。这些方法需要用于数据提取和处理的新软件解决方案。这些解决方案有助于支持各种研究渠道,从细胞化合物的定位到树冠的量化。但是,由于现有工具的多样性以及缺少中央存储库,对于研究人员而言,要确定最适合其研究的软件具有挑战性。结果我们提供了一个在线的手动管理数据库,其中引用了90多种植物图像分析软件解决方案。网站plant-image-analysis.org以统一和简洁的方式介绍了每个软件,使用户能够确定可满足其实验需求的解决方案。该网站还提供用户反馈,评估和新软件提交功能。结论plant-image-analysis.org数据库提供了现有植物图像分析软件的概述。这种工具箱的目的是帮助用户找到解决方案,并为开发人员提供一种交流和交流其工作的方式。

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