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Prevalence, species identification and genotyping Cryptosporidium from livestock and deer in a catchment in the Cairngorms with a history of a contaminated public water supply

机译:凯恩戈姆斯集水区牲畜和鹿的隐孢子虫的流行,物种鉴定和基因分型,历史上公共供水受到污染

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Background The apicomplexan parasite Cryptosporidium represents a threat to water quality and public health. An important zoonotic species involved in human cryptosporidiosis from contaminated water is Cryptosporidium parvum (C. parvum), the main reservoirs of which are known to be farm livestock particularly neonatal calves, although adult cattle, sheep, lambs and wildlife are also known to contribute to catchment loading of C. parvum. This study aimed to establish Cryptosporidium prevalence, species and genotype in livestock, deer and water in a catchment with a history of Cryptosporidium contamination in the public water supply. Methods A novel method of processing adult ruminant faecal sample was used to concentrate oocysts, followed by a nested species specific multiplex (nssm) PCR, targeting the 18S rRNA gene, to speciate Cryptosporidium. A multilocus fragment typing (MLFT) tool was used, in addition to GP60 sequencing, to genotype C. parvum positive samples. Results A very high prevalence of Cryptosporidium was detected, with speciation identifying a predominance of C. parvum in livestock, deer and water samples. Four GP60 subtypes were detected within C. parvum with the majority IIaA15G2R1 which was detected in all host species and on all farms. Multilocus fragment typing further differentiated these into 6 highly related multilocus genotypes. Conclusion The high prevalence of Cryptosporidium detected was possibly due to a combination of the newly developed sample processing technique used and a reflection of the high rates of the parasite present in this catchment. The predominance of C. parvum in livestock and deer sampled in this study suggested that they represented a significant risk to water quality and public health. Genotyping results suggested that the parasite is being transmitted locally within the study area, possibly via free-roaming sheep and deer. Further studies are needed to verify particular host associations with subtypes/MLGs. Land and livestock management solutions to reduce Cryptosporidium on farm and in the catchment are planned with the aim to improve animal health and production as well as water quality and public health.
机译:背景蚜虫寄生虫隐孢子虫对水质和公共卫生构成威胁。与人类隐孢子虫病有关的一种重要的人畜共患病物种是被污染的水,小隐隐孢子虫(C. parvum),虽然其成年的牛,绵羊,羔羊和野生动物也有助于造成这种病,但主要储藏地是农场牲畜,特别是新生牛犊。小流藻的集水量。这项研究旨在确定在公共供水中存在隐孢子虫污染历史的流域,牲畜,鹿和水中的隐孢子虫流行,种类和基因型。方法:采用一种新的处理成年反刍动物粪便样品的方法来浓缩卵囊,然后以18S rRNA基因为靶标的巢状物种特异性多重PCR(nssm)专门用于隐孢子虫。除GP60测序外,还使用了多基因座片段分型(MLFT)工具对C. parvum阳性样本进行基因分型。结果检测到隐孢子虫的患病率很高,物种鉴定表明家畜,鹿和水样中的隐孢子虫占优势。在小隐孢子虫中检测到四种GP60亚型,其中大多数为IIaA15G2R1,在所有寄主物种和所有农场中均检测到。多基因座片段分型进一步将它们分为6个高度相关的多基因座基因型。结论检测到的隐孢子虫的高流行可能是由于使用了新开发的样品处理技术以及该流域中高寄生虫率的反映。这项研究对牲畜和鹿中的小球藻占优势地位,表明它们对水质和公共卫生构成了重大风险。基因分型的结果表明,该寄生虫可能是通过自由漫游的绵羊和鹿在研究区域内局部传播的。需要进一步的研究来验证特定宿主与亚型/ MLG的关联。计划减少土地和牲畜管理解决方案以减少农场和流域的隐孢子虫病,以改善动物健康和生产以及水质和公共卫生。

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