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Doubly regularized Cox regression for high-dimensional survival data with group structures

机译:具有组结构的高维生存数据的双正则化Cox回归

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The goal of this research is to integrate group structures to the Cox proportional hazards model with ultra highdimensional predictors. By doubly regularizing the partial likelihood based on the Cox model with convex penalties, this method is able to perform group selection and withingroup selection simultaneously. Compared with methods ignoring the structure information, our method yields better variable selection and more accurate prediction. The convexity of our regularized objective function makes the method numerically stable especially when the number of predictors far exceeds the number of the observations. A fast coordinate descent algorithm is exploited to avoid matrix operations and speed up the computation. Numerical experiments on simulated data demonstrate the good performance of our doubly regularized method. We analyze the TCGA ovarian cancer data with this new method.
机译:这项研究的目的是将群体结构与具有超高维预测因子的Cox比例风险模型相集成。通过基于带有凸惩罚的Cox模型对部分似然进行双重正则化,该方法能够同时执行组选择和组内选择。与忽略结构信息的方法相比,我们的方法产生了更好的变量选择和更准确的预测。我们正则化目标函数的凸性使该方法在数值上稳定,尤其是当预测变量的数量远远超过观察数量时。利用快速坐标下降算法来避免矩阵运算并加快计算速度。仿真数据的数值实验证明了我们的双正则化方法的良好性能。我们使用这种新方法分析了TCGA卵巢癌数据。

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