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首页> 外文期刊>Royal Society Open Science >Algorithmically probable mutations reproduce aspects of evolution, such as convergence rate, genetic memory and modularity
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Algorithmically probable mutations reproduce aspects of evolution, such as convergence rate, genetic memory and modularity

机译:从算法上讲,可能的突变再现了进化的各个方面,例如收敛速度,遗传记忆和模块化

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Natural selection explains how life has evolved over millions of years from more primitive forms. The speed at which this happens, however, has sometimes defied formal explanations when based on random (uniformly distributed) mutations. Here, we investigate the application of a simplicity bias based on a natural but algorithmic distribution of mutations (no recombination) in various examples, particularly binary matrices, in order to compare evolutionary convergence rates. Results both on synthetic and on small biological examples indicate an accelerated rate when mutations are not statistically uniform but algorithmically uniform . We show that algorithmic distributions can evolve modularity and genetic memory by preservation of structures when they first occur sometimes leading to an accelerated production of diversity but also to population extinctions, possibly explaining naturally occurring phenomena such as diversity explosions (e.g. the Cambrian) and massive extinctions (e.g. the End Triassic) whose causes are currently a cause for debate. The natural approach introduced here appears to be a better approximation to biological evolution than models based exclusively upon random uniform mutations, and it also approaches a formal version of open-ended evolution based on previous formal results. These results validate some suggestions in the direction that computation may be an equally important driver of evolution. We also show that inducing the method on problems of optimization, such as genetic algorithms, has the potential to accelerate convergence of artificial evolutionary algorithms.
机译:自然选择解释了生命如何从更原始的形式进化了数百万年。但是,基于随机(均匀分布)的突变时,这种发生的速度有时会违背正式的解释。在这里,我们研究了在各种示例(尤其是二进制矩阵)中基于突变的自然分布(无重组)的简单偏差的应用,以便比较进化的收敛速度。合成和小型生物学实例的结果都表明,当突变在统计上不是一致而是在算法上一致时,加速了。我们表明,算法分布可以通过保留结构(最初出现时有时会导致多样性加速产生,但也会导致种群灭绝)来保护结构,从而发展模块化和遗传记忆,这可能解释了自然发生的现象,例如多样性爆炸(例如寒武纪)和大规模灭绝(例如三叠纪末期),其原因目前正在引起争论。与仅基于随机一致突变的模型相比,此处引入的自然方法似乎是对生物进化的更好近似,并且它也基于以前的正式结果而接近开放式进化的正式版本。这些结果证实了一些建议,即计算可能是进化的同等重要推动力。我们还表明,在遗传算法等优化问题上引入该方法具有加速人工进化算法收敛的潜力。

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