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Integrated radiomic framework for breast cancer and tumor biology using advanced machine learning and multiparametric MRI

机译:使用高级机器学习和多参数MRI的乳腺癌和肿瘤生物学集成放射学框架

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Radiomics deals with the high throughput extraction of quantitative textural information from radiological images that not visually perceivable by radiologists. However, the biological correlation between radiomic features and different tissues of interest has not been established. To that end, we present the radiomic feature mapping framework to generate radiomic MRI texture image representations called the radiomic feature maps (RFM) and correlate the RFMs with quantitative texture values, breast tissue biology?using quantitative?MRI and classify benign from malignant tumors. We tested our radiomic feature mapping framework on a retrospective cohort of 124 patients (26 benign and 98 malignant) who underwent multiparametric breast MR imaging at 3?T. The MRI parameters used were T1-weighted imaging, T2-weighted imaging, dynamic contrast enhanced MRI (DCE-MRI) and diffusion weighted imaging (DWI). The RFMs were computed by convolving MRI images with statistical filters based on first order statistics and gray level co-occurrence matrix features. Malignant lesions demonstrated significantly higher entropy on both post contrast DCE-MRI (Benign-DCE?entropy: 5.72?±?0.12, Malignant-DCE?entropy: 6.29?±?0.06, p =?0.0002) and apparent diffusion coefficient (ADC) maps as compared to benign lesions (Benign-ADC?entropy: 5.65?±?0.15, Malignant ADC?entropy: 6.20?±?0.07, p =?0.002). There was no significant difference between glandular tissue entropy values in the two groups. Furthermore, the RFMs from DCE-MRI and DWI demonstrated significantly different RFM curves for benign and malignant lesions indicating their correlation to tumor vascular and cellular heterogeneity respectively. There were significant differences in the quantitative MRI metrics of ADC and perfusion. The multiview IsoSVM model classified benign and malignant breast tumors with sensitivity and specificity of 93 and 85%, respectively, with an AUC of 0.91.
机译:放射线学处理放射线图像中放射学家无法视觉感知的定量纹理信息的高通量提取。然而,尚未建立放射学特征与感兴趣的不同组织之间的生物学相关性。为此,我们提出了放射线特征映射框架,以生成称为放射线特征图(RFM)的放射线MRI纹理图像表示,并将RFM与定量纹理值,乳腺组织生物学(使用定量MRI)相关联,并对恶性肿瘤的良性进行分类。我们对124例在3?T接受了多参数乳腺MR成像的患者(26例良性和98例恶性)进行回顾性研究,测试了我们的放射学特征映射框架。使用的MRI参数为T1加权成像,T2加权成像,动态对比增强MRI(DCE-MRI)和扩散加权成像(DWI)。通过基于一阶统计量和灰度共生矩阵特征的统计过滤器对MRI图像进行卷积来计算RFM。对比后DCE-MRI(Benign-DCE熵:5.72±0.12,恶性DCE熵:6.29±0.06,p = 0.0002)和表观扩散系数(ADC)均显示出较高的熵与良性病变相比(Benign-ADC熵:5.65±±0.15,恶性ADC熵:6.20±±0.07,p = 0.002)。两组的腺组织熵值之间无显着差异。此外,来自DCE-MRI和DWI的RFM对良性和恶性病变显示出明显不同的RFM曲线,表明它们分别与肿瘤血管和细胞异质性相关。 ADC和灌注的定量MRI指标存在显着差异。 IsoSVM多视图模型对敏感性和特异性分别为93和85%的AUC为0.91的良性和恶性乳腺肿瘤进行分类。

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