...
首页> 外文期刊>Network Biology >Constructing ecological interaction networks by correlation analysis: hints from community sampling
【24h】

Constructing ecological interaction networks by correlation analysis: hints from community sampling

机译:通过相关性分析构建生态互动网络:社区抽样的提示

获取原文

摘要

A set of methodology for constructing ecological interaction networks by correlation analysis of community sampling data was presented in this study. Nearly 30 data sets at different levels of taxa for different sampling seasons and locations were used to construct networks and find network properties. I defined the network constructed by Pearson linear correlation is the linear network, and the network constructed by quasi-linear correlation measure (e.g., Spearman correlation) is the quasi-linear network. Two taxa with statistically significant linear or quasi-linear correlation are determined to interact. The quasi-linear network is more general than linear network. The results reveled that correlation distributions of Pearson linear correlation and partial linear correlation constructed networks are unimodal functions and most of them are short-head (mostly negative correlations) and long-tailed (mostly positive correlations). Spearman correlation distributions are either long-head and short-tailed unimodal functions or monotonically increasing functions. It was found that both mean partial linear correlation and mean Pearson linear correlation were approximately 0. The proportion of positive (partial) linear correlations declined significantly with the increase in taxa. The mean (partial) linear correlation declined significantly with the increase of taxa. More than 90% of network interactions are positive interactions. The average connectance was 9.8% (9.3%) for (partial) linear correlation constructed network. The parameter λ in power low distribution (L(x)=x-λ) increased as the decline of taxon level (from functional group to species) for the partial linear correlation constructed network. λ is in average 0.8 to 0.9. The number of (positive) interactions increased with the number of taxa for both linear and partial linear correlations constructed networks. The addition of a taxon would result in an increase of 0.4 (0.3) interactions (positive interactions) in the partial linear correlation constructed network. And the addition of a taxon would result in an increase of 3 interactions (positive interactions) in the linear correlation constructed network. For partial linear correlation constructed network, the network connectance decreased as the number of taxa. The constant connectance hypothesis did not hold for our networks. It was found that network structure changed with season and location. The same taxon in the network would connect to different taxa as the change of season and location. A higher level of species aggregation may used to find a more stable network structure. Positive interactions were considered to be caused mainly by mutualism, predation/parasitism, etc. the number and portion of positive interactions may be the most important indices for community stability and functionality. Mutualism is the most significant trophic relationship, seconded by predation/parasitism, and competition is the worst for community stability.
机译:提出了一套通过社区抽样数据相关性分析构建生态互动网络的方法。针对不同的采样季节和位置,使用了不同分类单元级别的近30个数据集来构建网络并查找网络属性。我定义了由Pearson线性相关构建的网络是线性网络,而由拟线性相关度量(例如Spearman相关)构建的网络是准线性网络。确定具有统计显着线性或准线性相关性的两个分类单元进行交互。准线性网络比线性网络更笼统。结果表明,Pearson线性相关和部分线性相关构建的网络的相关分布是单峰函数,并且大多数是短头(主要是负相关)和长尾(主要是正相关)。 Spearman相关分布是长头和短尾单峰函数或单调递增函数。发现平均部分线性相关和平均Pearson线性相关均约为0。正(部分)线性相关的比例随着分类单元的增加而显着下降。随着分类单元的增加,平均(部分)线性相关显着下降。超过90%的网络互动是积极互动。 (部分)线性相关构建网络的平均连接率为9.8%(9.3%)。对于部分线性相关构造网络,低功率分布中的参数λ(L(x)=x-λ)随着分类单元水平(从功能组到物种)的下降而增加。 λ平均为0.8至0.9。对于线性和部分线性相关构建的网络,(正)相互作用的数量随分类单元的数量而增加。分类单元的添加将导致部分线性相关构建网络中的交互作用(正向交互作用)增加0.4(0.3)。并且添加分类单元将导致线性相关构建网络中的3种相互作用(正相互作用)增加。对于部分线性相关构造的网络,网络连通性随着分类单元的数量而减少。恒定连接假设不适用于我们的网络。发现网络结构随季节和位置而变化。随着季节和位置的变化,网络中的同一分类单元将连接到不同的分类单元。更高级别的物种聚集可以用来找到更稳定的网络结构。积极互动被认为主要是由互惠,掠夺/寄生虫等引起的。积极互动的数量和部分可能是社区稳定性和功能性的最重要指标。互惠互利是最重要的营养关系,其次是掠夺/寄生虫,而竞争对社区稳定最不利。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号