...
首页> 外文期刊>Microbes and Environments >Population Dynamics of Cyanomyovirus in a Tropical Eutrophic Reservoir
【24h】

Population Dynamics of Cyanomyovirus in a Tropical Eutrophic Reservoir

机译:热带富营养化水库中犬瘟病毒的种群动态

获取原文
   

获取外文期刊封面封底 >>

       

摘要

Samples from three stations in Kranji Reservoir, Singapore ( n = 21) were collected and analyzed for cyanomyovirus abundance and diversity. A total of 73 different g20 (viral capsid assembly protein genes) amino acid sequences were obtained from this study. A phylogenetic analysis revealed that the 73 segments were distributed in six major clusters (α to ζ), with four unique subclusters, which were identified as KRM-I, KRM-II, KRM-III, and KRM-IV. The cyanophage community in Kranji Reservoir exhibited a large degree of diversity; the clones obtained in this study showed similarities to those from many different environments, including oceans, lakes, bays, and paddy floodwater, as well as clones from paddy field soils. However, the sequences in this study were generally found to be more closely related to the g20 sequences of freshwaters and brackish waters than those from marine environments. The rarefaction curves and Chao 1 indices from this study showed that the diversity of the cyanomyovirus community was greater during the Inter-monsoon periods than the Southwest and Northeast Monsoons. A few seasonal changes in the taxa were observed: (i) Cluster ζ was absent during the Southwest Monsoon, and (ii) most of the samples fell into Group 3 in the PCA score plot during the Northeast Monsoon, and the fraction of Cluster ? increased significantly.
机译:收集了新加坡克兰芝水库(n = 21)三个站点的样本,并对其蓝藻病毒的丰度和多样性进行了分析。从这项研究中获得了总共73个不同的g20(病毒衣壳装配蛋白基因)氨基酸序列。系统发育分析表明,这73个片段分布在六个主要簇(α到ζ)中,具有四个独特的子簇,分别为KRM-1,KRM-2,KRM-3和KRM-1。克兰芝水库的蓝藻群落具有很大的多样性。本研究中获得的克隆与许多不同环境中的克隆相似,包括海洋,湖泊,海湾和稻田洪水,以及稻田土壤中的克隆。但是,一般认为这项研究中的序列与淡水和微咸水的g20序列比海洋环境中的序列更紧密相关。这项研究的稀疏曲线和Chao 1指数表明,在季风间期,蓝藻病毒群落的多样性比西南季风和东北季风更大。在分类单元中观察到一些季节性变化:(i)在西南季风期间不存在类群ζ,并且(ii)在东北季风期间PCA评分图中大部分样本落入了第3组,而类群η的比例却很小。明显增加。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号