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首页> 外文期刊>Microorganisms >In Silico Analysis of Genetic VapC Profiles from the Toxin-Antitoxin Type II VapBC Modules among Pathogenic, Intermediate, and Non-Pathogenic Leptospira
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In Silico Analysis of Genetic VapC Profiles from the Toxin-Antitoxin Type II VapBC Modules among Pathogenic, Intermediate, and Non-Pathogenic Leptospira

机译:在计算机上分析II型毒素-抗毒素VapBC模块在致病性,中间性和非致病性钩端螺旋体中的遗传VapC谱

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Pathogenic Leptospira spp. is the etiological agent of leptospirosis. The high diversity among Leptospira species provides an array to look for important mediators involved in pathogenesis. Toxin-antitoxin (TA) systems represent an important survival mechanism on stress conditions. vap BC modules have been found in nearly one thousand genomes corresponding to about 40% of known TAs. In the present study, we investigated TA profiles of some strains of Leptospira using a TA database and compared them through protein alignment of VapC toxin sequences among Leptospira spp. genomes. Our analysis identified significant differences in the number of putative vap BC modules distributed in pathogenic, saprophytic, and intermediate strains: four in L. interrogans , three in L. borgpetersenii , eight in L. biflexa , and 15 in L. licerasiae . The VapC toxins show low identity among amino acid sequences within the species. Some VapC toxins appear to be exclusively conserved in unique species, others appear to be conserved among pathogenic or saprophytic strains, and some appear to be distributed randomly. The data shown here indicate that these modules evolved in a very complex manner, which highlights the strong need to identify and characterize new TAs as well as to understand their regulation networks and the possible roles of TA systems in pathogenic bacteria.
机译:致病性钩端螺旋体是钩端螺旋体病的病因。钩端螺旋体物种之间的高度多样性为寻找参与发病机理的重要介体提供了条件。毒素-抗毒素(TA)系统代表了在压力条件下的重要生存机制。在近一千个基因组中发现了vap BC模块,约占已知TA的40%。在本研究中,我们使用TA数据库调查了一些钩端螺旋体菌株的TA谱,并通过钩端螺旋体之间VapC毒素序列的蛋白质比对比较了它们。基因组。我们的分析确定了在致病性,腐生性和中间菌株中分布的推定BC BC模块数量的显着差异:询问豆中有4个,询问豆中有3个,双弯曲杆菌中有3个,双弯曲杆菌中有8个,利落乳杆菌中有15个。 VapC毒素在物种内的氨基酸序列之间显示出较低的同一性。一些VapC毒素似乎仅在独特物种中保守,其他VapC毒素似乎在致病或腐生菌株中保守,而另一些似乎随机分布。此处显示的数据表明,这些模块以非常复杂的方式进化,这突出表明了对鉴定和表征新的TA以及了解其调控网络以及TA系统在致病细菌中可能发挥的作用的强烈需求。

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