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Phylogenetic and Molecular Profile of Staphylococcus aureus Isolated from Bloodstream Infections in Northeast Brazil

机译:从巴西东北部血流感染中分离出的金黄色葡萄球菌的系统发生和分子概况

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Staphylococcus aureus is a notorious human pathogen associated with serious nosocomial and community-acquired infections, such as pneumonia, meningitis, endocarditis, toxic shock syndrome, and sepsis, among others. The objective of this study was to investigate the molecular profile, antimicrobial resistance, and clonal diversity of S. aureus isolated from the bloodstream. The determination of the minimum inhibitory concentration (MIC) of the antimicrobial was performed by an automated method. The presence of several virulence and resistance genes was evaluated by PCR. In addition, multilocus sequence typing (MLST) was used to analyze the clonal diversity of S. aureus . A high resistance to oxacillin (78%), clindamycin (78%), erythromycin (70%), ciprofloxacin (61%), and gentamicin (52%) was observed among the isolates. In most of them, the following virulence genes were detected: hlb (83%), ebpS (61%), icaA (57%), fnbpA (17%), and clfA (13%). Only one isolate carried the pvl gene. MLST analysis identified five new sequence types (STs): 5429, 5430, 5431, 5432, and 5433, as well as another seven—ST5, ST97, ST398, ST101, ST30, ST461, and ST2779—among the remaining strains. These seven STs and the four new STs are clustered in four clonal complexes: CC1, CC2, CC7, and CC17. Phylogenetic analysis showed the genetic relationship of the five new ST strains with another 18 strains. Altogether, these analyses indicate the horizontal transfer acquisition of virulence factor genes and multidrug resistance.
机译:金黄色葡萄球菌是一种臭名昭著的人类病原体,与严重的医院感染和社区获得性感染有关,例如肺炎,脑膜炎,心内膜炎,中毒性休克综合症和败血症等。这项研究的目的是调查从血流中分离出的金黄色葡萄球菌的分子谱,抗药性和克隆多样性。抗菌剂的最小抑菌浓度(MIC)的测定是通过自动化方法进行的。通过PCR评估了几种毒力和抗性基因的存在。另外,使用多基因座序列分型(MLST)来分析金黄色葡萄球菌的克隆多样性。在分离物中,对奥沙西林(78%),克林霉素(78%),红霉素(70%),环丙沙星(61%)和庆大霉素(52%)的耐药性较高。在大多数病毒中,检测到以下毒力基因:hlb(83%),ebpS(61%),icaA(57%),fnbpA(17%)和clfA(13%)。仅一种分离株携带pvl基因。 MLST分析确定了五个新序列类型(ST):5429、5430、5431、5432和5433,以及其余七个菌株中的另外七个-ST5,ST97,ST398,ST101,ST30,ST461和ST2779。这七个ST和四个新ST聚集在四个克隆复合体中:CC1,CC2,CC7和CC17。系统发育分析表明这五个新的ST菌株与另外18个菌株的遗传关系。总之,这些分析表明毒力因子基因的水平转移获得和多药耐药性。

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