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首页> 外文期刊>Frontiers in Microbiology >Corrigendum: Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel Genera
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Corrigendum: Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel Genera

机译:更正:系统经济学和比较基因组学研究强有力地支持将分枝杆菌属划分为改良的分枝杆菌属和四个新属

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摘要

In the original article, there was an error. Based on the branching position of Mycobacterium vulneris (van Ingen et al., 2009 ) in different phylogenomic trees and on multiple identified molecular signatures that this species shared with a clade of rapid growing mycobacteria, we proposed a reclassification of M. vulneris , into a new genus, Mycolicibacterium , corresponding to a clade of rapid-growing mycobacteria. However, it was noted in our article that the branching of M. vulneris , which is a slow-growing species with rapid-growing mycobacteria, was anomalous. In a Frontiers commentary, Tortoli ( 2018 ) indicated that the genome sequence of M. vulneris , originally available in the NCBI genome database (accession CCBG00000000 ; Croce et al., 2014 ), was mislabeled and very likely corresponded to Mycobacterium porcinum (a rapid grower). Tortoli ( 2018 ) also reported the sequencing of the type strain of M. vulneris , DSM 45247 ~(T) and this genome sequence (accession NCXM01000000 ) showed the branching of M. vulneris within the slow-growing group of mycobacteria, belonging to the genus Mycobacterium . Our own analysis with this new genome sequence also confirms the branching of M. vulneris within the delimited genus Mycobacterium , encompassing different slow-growing mycobacteria. As a result, the transfer of M. vulneris into the genus Mycolicibacterium as proposed in Table 11 of our article was incorrect as a direct result of the mislabeling of the available genome sequence for this species. To correct this error, we propose that the species Mycolicibacterium vulneris (Gupta et al., 2018 ) should be reinstated to its previous basonym Mycobacterium vulneris (van Ingen et al., 2009 ) and as part of the genus Mycobacterium (Gupta et al., 2018 ). The authors apologize for this error and state that this does not change the scientific conclusions of the article in any way.
机译:在原始文章中,有一个错误。基于分枝杆菌在不同系统树中的分支位置(van Ingen等,2009),并基于该物种与快速增长的分枝杆菌属共享的多个鉴定的分子特征,我们提出了将分枝杆菌重新分类为新属分枝杆菌,对应于快速增长的分枝杆菌。但是,在我们的文章中指出,长毛分支杆菌(M. vulneris)的分支是异常的,它是一种缓慢生长的分支杆菌,具有快速生长的分支杆菌。 Tortoli(2018)在Frontiers评论中指出,最初在NCBI基因组数据库(登录号CCBG00000000; Croce等人,2014)中可获得的短支原体的基因组序列标签错误,很可能对应于猪分枝杆菌(一种快速种植者)。 Tortoli(2018)还报道了V. vulneris型菌株DSM 45247〜(T)的测序,该基因组序列(登录号NCXM01000000)显示了M. vulneris在慢增长的分枝杆菌属中的分支。分枝杆菌属。我们对这种新的基因组序列的分析也证实了分枝杆菌属在分枝杆菌属中的分支,包括不同的缓慢生长的分枝杆菌。结果,如本文文章表11中所提出的,将支原体转移到分枝杆菌属中是不正确的,这是该物种可用基因组序列标记错误的直接结果。为了纠正此错误,我们建议应将Vulneris分支杆菌(Gupta等,2018)恢复为其先前的基础名称Vulneris分支杆菌(van Ingen等,2009),并将其作为分枝杆菌属的一部分(Gupta等。 ,2018)。作者对此错误表示歉意,并声明这不会以任何方式改变本文的科学结论。

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