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Full-length genomic and molecular characterization of Canine parvovirus in dogs from North of Brazil

机译:巴西北部犬细小病毒的全长基因组学和分子特征

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With the objective of characterizing Canine parvovirus (CPV) from some suspected fecal samples of dogs collected from the Veterinarian Hospital in Belém city, five positive samples were found by PCR assay and an update molecular characterization was provided of the CPV-2 circulation in Belém. Through sequencing of the complete DNA sequences (NS1, NS2, VP1, and VP2 genes), the CPV-2 strain was identified as CPV-2b (Asn426Asp) circulating in Belém. The CPV-2b strain with a different change at the position Tyr324Leu was detected in all samples assessed and thus reported for the first time for the scientific community. Phylogenetic analysis indicated that Belém CPV-2b and CPV-2a strains would be related to a cluster with samples after the 1990s, suggesting that CPV-2b in Belém originated from CPV- 2a circulating in Brazil after the 1990s. Potential recombination events were analyzed using RDP4 and SplitsTree4; therefore, results suggest that CPV-2 sequences here described were not potentially recombination events. Continuous monitoring and molecular characterization of CPV- 2 samples are needed not only to identify possible genetic and antigenic changes that may interfere with the effectiveness of vaccines but also to bring a better understanding of the mechanisms that drive the evolution of CPV-2 in Brazil. Full-Text PDF
机译:为了从贝伦市兽医医院收集的一些可疑狗粪便样本中鉴定犬细小病毒(CPV),通过PCR检测发现了五个阳性样本,并提供了贝伦CPV-2循环的最新分子特征。通过测序完整的DNA序列(NS1,NS2,VP1和VP2基因),将CPV-2菌株鉴定为在贝伦市流通的CPV-2b(Asn426Asp)。在所有评估样品中均检测到Tyr324Leu位置具有不同变化的CPV-2b菌株,因此首次向科学界报告。系统发育分析表明,贝伦的CPV-2b和CPV-2a菌株与1990年代以后的样品集群有关,这表明贝伦的CPV-2b起源于1990年代后在巴西流通的CPV-2a。使用RDP4和SplitsTree4分析了潜在的重组事件。因此,结果表明本文所述的CPV-2序列不是潜在的重组事件。需要对CPV-2样品进行连续监测和分子表征,不仅需要确定可能干扰疫苗有效性的可能的遗传和抗原变化,而且还需要更好地了解推动巴西CPV-2进化的机制。全文PDF

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