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首页> 外文期刊>African Journal of Microbiology Research >Use of a new seminested PCR combined with enzymatic digestion analysis for detection and differentiation of Legionella species and Legionella pneumophila in environmental water and sputum samples
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Use of a new seminested PCR combined with enzymatic digestion analysis for detection and differentiation of Legionella species and Legionella pneumophila in environmental water and sputum samples

机译:使用新型半巢式PCR结合酶消化分析技术检测和区分环境水和痰液样品中的军团菌和嗜肺军团菌

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A new seminested PCR combined with enzymatic digestion analysis method was developed for detection and differentiation of?Legionella?spp. and?Legionella pneumophilain environmental water and sputum samples. The seminested PCR was a novel target for all?Legionella?testing; it detected 42?Legionella?spp. and 12 other bacterial species without the cross-reactivity, and detected 1 fg of?Legionella?DNA in each PCR. The enzymatic digestion analysis was differentiated?L. pneumophila?from other?Legionella?spp.. The aim of this study was to investigate the usefulness of the new scheme for detection of?L. pneumophila?in environmental and sputum samples. A total of 24 water samples and 215 sputum samples were detected by the new scheme. Of 24 environmental water samples examined by this scheme and culture, 20 were found to be positive for?Legionella?spp.. Of these 20 samples, 85.0% (17 of 20) were positive by both PCR and culture, 10.0% (2 of 20) were positive by PCR alone, and 5.0% (1 of 20) was positive by culture alone. Among these 20 samples, 14 samples were positive for?L. pneumophila?by enzymatic digestion analysis, and they were verified by gene sequence analysis. Of the 215 sputum samples examined, PCR was found to be an essential diagnostic tool because only 6.25% (1 of 16) sputum samples were determined to be?L. pneumophila?by culture. The seminested PCR combined with enzymatic digestion analysis is an appropriate and useful method forLegionella?surveillance. The combination of this scheme with culture method may be the best protocol for the detection of?Legionella?species in environmental water and sputum samples.
机译:建立了一种新的半巢式PCR结合酶切分析方法,用于检测和鉴定军团菌。和嗜肺军团菌环境水和痰液样本。半巢式PCR是所有军团菌检测的新靶标。它检测到42?Legionella?spp。其他12种无交叉反应的细菌,每次PCR检测到1 fg的军团菌DNA。酶消化分析结果有所不同。这项研究的目的是调查新方案检测L的有用性。肺和环境样品中的肺炎。新方案共检测了24个水样和215个痰样。通过该方案和培养物检测的24个环境水样品中,有20个被检出的军团菌呈阳性。在这20个样品中,PCR和培养物均为85.0%(20个中的17个)呈阳性,10.0%(2个中的2个为阳性)。仅通过PCR即可获得20%的阳性反应,而仅通过培养即可获得5.0%的阳性反应(20之1)。在这20个样品中,有14个样品的L阳性。通过酶消化分析嗜肺炎,并通过基因序列分析对其进行验证。在检查的215个痰样本中,PCR被认为是必不可少的诊断工具,因为只有6.25%(16个痰中的1个)痰样本被确定为?L。肺炎?半巢式PCR与酶切分析相结合是一种适用于军团菌监测的合适且有用的方法。该方案与培养方法的结合可能是检测环境水和痰液样品中的军团菌的最佳方法。

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