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Open science in practice: Learning integrated modeling of coupled surface?¢????subsurface flow processes from scratch

机译:实践中的开放科学:从零开始学习耦合面的集成建模-地下流动过程

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Integrated modeling of coupled surface?¢????subsurface flow and ensuing role in diverse Earth system processes is of current research interest to characterize nonlinear rainfall?¢????runoff response and also to understand land surface energy balances, biogeochemical processes, geomorphological dynamics, etc. A growing number of complex models have been developed for water?¢????related research, and many of these are made available to the Earth science community. However, relatively few resources have been made accessible to the potentially large group of Earth science and engineering users. New users have to invest an extraordinary effort to study the models. To provide a stimulating experience focusing on the learning curve of integrated modeling of coupled surface?¢????subsurface flow, we describe use cases of an open source model, the Penn State Integrated Hydrologic Model, PIHM. New users were guided through data processing and model application by reproducing a numerical benchmark problem and a real?¢????world watershed simulation. Specifically, we document the PIHM application and its computational workflow to enable intuitive understanding of coupled surface?¢????subsurface flow processes. In addition, we describe the user experience as important evidence of the significance of reusability. The interaction shows that documentation of data, software, and computational workflow in research papers is a promising method to foster open scientific collaboration and reuse. This study demonstrates how open science practice in research papers would promote the utility of open source software. Addressing such open science practice in publications would promote the utility of journal papers. Further, popularization of such practice will require coordination among research communities, funding agencies, and journals.
机译:目前,耦合表面-地下流及其在不同地球系统过程中的作用的综合建模对于表征非线性降雨的径流响应以及了解地表能量平衡,生物地球化学过程,已经开发了越来越多的复杂模型用于与水有关的研究,并且其中许多模型可供地球科学界使用。但是,潜在的大量地球科学和工程用户可以使用相对较少的资源。新用户必须投入大量精力来研究模型。为了提供专注于耦合表面-地下流集成模型学习曲线的刺激性经验,我们描述了开源模型Penn State综合水文模型PIHM的用例。通过再现数值基准问题和真实的世界分水岭模拟,引导新用户进行数据处理和模型应用。具体来说,我们记录了PIHM应用程序及其计算工作流程,以使人们能够直观地了解耦合的表面-地下流动过程。此外,我们将用户体验描述为可重用性重要性的重要证据。交互作用表明,研究论文中的数据,软件和计算工作流程文档化是一种促进开放式科学协作和重用的有前途的方法。这项研究表明研究论文中的开放科学实践将如何促进开源软件的实用性。解决出版物中的这种开放式科学实践将促进期刊论文的实用性。此外,这种做法的普及将需要研究社区,资助机构和期刊之间进行协调。

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