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Altered diversity and composition of the gut microbiome in patients with cervical cancer

机译:宫颈癌患者肠道微生物组的多样性和组成改变

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Gut microbiota have been implicated in the development of many human diseases, including both digestive diseases and non-digestive diseases. In this study, we investigated whether the gut bacteria differed in cervical cancer (CCa) patients compared with healthy controls by 16S rRNA sequencing analysis. Subjects including eight CCa and five healthy controls were included. Microbiota profiles in fecal DNA were characterized by PCR amplification of the 16S rRNA V4 variable region and deep sequencing using the Illumina HiSeq platform. The CCa-associated gut microbiota had an increasing trend in alpha diversity, although statistical significance was not reached. Inter-group variability in community structure by beta diversity analysis showed a clear separation between cancer patients and healthy controls. Gut microbiota profiles were different between patients and controls; namely, the proportions of Proteobacteria phylum was notably higher in patients with CCa (ρ?=?0.012). Seven genera differentiated significantly in relative abundance between CCa and controls (all ρ?&?0.05), including Escherichia – Shigella , Roseburia , Pseudomonas , Lachnoclostridium , Lachnospiraceae_UCG - 004 , Dorea and Succinivibrio . The characteristic microbiome in CCa patients was also identified by linear discriminant analysis effect size (LEfSe). The phylum Proteobacteria , and the genus Parabacteroides, Escherichia_Shigells and Roseburia may provide novel potential biomarkers for CCa. Taken together, this is the first study on gut microbiota in patients with CCa, and demonstrated the significantly altered diversity and composition.
机译:肠道菌群与许多人类疾病的发展有关,包括消化系统疾病和非消化系统疾病。在这项研究中,我们通过16S rRNA测序分析调查了宫颈癌(CCa)患者与健康对照组相比肠道细菌是否有所不同。纳入对象包括八个CCa和五个健康对照。通过PCR扩增16S rRNA V4可变区并使用Illumina HiSeq平台进行深度测序来表征粪便DNA中的微生物群谱。尽管未达到统计学意义,但与CCa相关的肠道菌群的α多样性呈上升趋势。通过β多样性分析,社区结构的群体间变异性表明癌症患者和健康对照之间存在明显的分离。肠道菌群谱在患者和对照组之间是不同的。也就是说,CCa患者门诊中Proteobacteria phylum的比例明显更高(ρ?=?0.012)。七个属的CCa与对照之间的相对丰度差异显着(均为ρ<0.05),包括埃希氏菌属-志贺氏菌,玫瑰菌,假单胞菌,梭状芽孢杆菌,链霉菌科_UCG-004,多雷亚菌和琥珀酸弧菌。 CCa患者的特征性微生物组也通过线性判别分析效应大小(LEfSe)进行鉴定。 Proteobacteria属和Parabacteroides属,Escherichia_Shigells和Roseburia可能为CCa提供新的潜在生物标记。综上所述,这是关于CCa患者肠道菌群的第一项研究,证明了多样性和组成的显着改变。

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