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Quantitative proteomics for identifying biomarkers for Rabies

机译:用于确定狂犬病生物标志物的定量蛋白质组学

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Introduction Rabies is a fatal acute viral disease of the central nervous system, which is a serious public health problem in Asian and African countries. Based on the clinical presentation, rabies can be classified into encephalitic (furious) or paralytic (numb) rabies. Early diagnosis of this disease is particularly important as rabies is invariably fatal if adequate post exposure prophylaxis is not administered immediately following the bite. Methods In this study, we carried out a quantitative proteomic analysis of the human brain tissue from cases of encephalitic and paralytic rabies along with normal human brain tissues using an 8-plex isobaric tags for relative and absolute quantification (iTRAQ) strategy. Results and conclusion We identified 402 proteins, of which a number of proteins were differentially expressed between encephalitic and paralytic rabies, including several novel proteins. The differentially expressed molecules included karyopherin alpha 4 (KPNA4), which was overexpressed only in paralytic rabies, calcium calmodulin dependent kinase 2 alpha (CAMK2A), which was upregulated in paralytic rabies group and glutamate ammonia ligase (GLUL), which was overexpressed in paralytic as well as encephalitic rabies. We validated two of the upregulated molecules, GLUL and CAMK2A, by dot blot assays and further validated CAMK2A by immunohistochemistry. These molecules need to be further investigated in body fluids such as cerebrospinal fluid in a larger cohort of rabies cases to determine their potential use as antemortem diagnostic biomarkers in rabies. This is the first study to systematically profile clinical subtypes of human rabies using an iTRAQ quantitative proteomics approach.
机译:简介狂犬病是一种致命的中枢神经系统急性病毒性疾病,在亚洲和非洲国家是严重的公共卫生问题。根据临床表现,狂犬病可分为脑性狂犬病或麻痹性狂犬病。该疾病的早期诊断尤为重要,因为如果在被咬后没有立即进行充分的暴露后预防,狂犬病总是致命的。方法在本研究中,我们使用相对复杂和绝对定量(iTRAQ)的8重等压标记,对脑炎和麻痹性狂犬病以及正常人脑组织的人脑组织进行了蛋白质组学定量分析。结果与结论我们鉴定了402种蛋白质,其中许多蛋白质在脑性狂犬病和麻痹性狂犬病之间差异表达,其中包括几种新型蛋白质。差异表达的分子包括仅在麻痹性狂犬病中过表达的karyopherin alpha 4(KPNA4),在麻痹性狂犬病中上调的钙调蛋白依赖性激酶2α(CAMK2A)和在麻痹性狂犬病中过表达的谷氨酸氨连接酶(GLUL)以及脑性狂犬病。我们通过斑点印迹法验证了两个上调的分子GLUL和CAMK2A,并通过免疫组织化学进一步验证了CAMK2A。这些分子需要在更多的狂犬病病例中在体液(例如脑脊髓液)中进行进一步研究,以确定其在狂犬病中作为事前诊断生物标志物的潜在用途。这是首次使用iTRAQ定量蛋白质组学方法系统分析人类狂犬病临床亚型的研究。

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