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The genome of the Black Bengal goat ( Capra hircus )

机译:黑孟加拉山羊(Capra hircus)的基因组

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Abstract ObjectivesBlack Bengal goat ( Capra hircus ), a member of the Bovidae family with the unique traits of high prolificacy, skin quality and low demand for food is the most socioeconomically significant goat breed in Bangladesh. Furthermore, the aptitude of adaptation and disease resistance capacity of it is highly notable which makes its whole genome information an area of research interest.Data descriptionThe genomic DNA of a local (Chattogram, Bangladesh) healthy male Black Bengal goat ( Capra hircus ) was extracted and then sequenced. Sequencing was completed using the Illumina HiSeq 2500 sequencing platform and the draft assembly was generated using the “ARS1” genome as the reference. MAKER gene annotation pipeline was utilized to annotate 26,458 gene models. Genome completeness was assessed using BUSCO (Benchmarking Universal Single-Copy Orthologs) which showed 82.5% completeness of the assembled genome.
机译:摘要目的黑孟加拉山羊(Capra hircus)是Bovidae家族的成员,具有高产,皮肤质量好和对食物的需求低等独特特征,是孟加拉国社会经济上最重要的山羊品种。此外,它的适应性和抗病能力也很显着,这使其全基因组信息成为了研究领域。数据描述提取了一只本地(印度洋图,孟加拉国)健康雄性孟加拉黑山羊(Capra hircus)的基因组DNA。然后排序。使用Illumina HiSeq 2500测序平台完成测序,并使用“ ARS1”基因组作为参考生成装配图。 MAKER基因注释管道用于注释26,458个基因模型。使用BUSCO(基准通用单拷贝直向同源物)评估基因组完整性,其显示组装的基因组的82.5%完整性。

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